Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02358 and BPUM_1307
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:50
# Commandline: needle
# -asequence pep-align/BSNT_02358___ykuK.1.24716.seq
# -bsequence pep-align/BPUM_1307___ykuK.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02358___ykuK-BPUM_1307___ykuK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02358___ykuK-BPUM_1307___ykuK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02358___ykuK
# 2: BPUM_1307___ykuK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 179
# Identity: 119/179 (66.5%)
# Similarity: 141/179 (78.8%)
# Gaps: 8/179 ( 4.5%)
# Score: 621.0
#
#
#=======================================
BSNT_02358___ 1 -------MADSFLFYNLSEAQMTFQDVMERLKAFVQKDPRSSYVLSIGTD 43
::||| :|||||..:.|.||:.|:|.|::|||||.||||||||
BPUM_1307___y 1 MKKEFLSVSDSF-YYNLSEDHLAFSDVVMRMKDFIRKDPRSVYVLSIGTD 49
BSNT_02358___ 44 SQVYRDYTKFITALHLHRTGKGAWGCLKNHTVDRPIHSLREKISLETAYS 93
|||.::.|||:||:||||.||||||||....:.||:.|||||||||||:|
BPUM_1307___y 50 SQVNQNVTKFMTAIHLHRIGKGAWGCLTQQVISRPVQSLREKISLETAFS 99
BSNT_02358___ 94 QETAAHILDGHLMDITDLLLPFTGEGADLTFEVHLDIGKKGLTKDLIQEM 143
|:..|.||:|.|.::.||||||..|||||.||.||||||||.||:|||||
BPUM_1307___y 100 QKVCADILEGPLTELMDLLLPFAEEGADLRFEAHLDIGKKGSTKELIQEM 149
BSNT_02358___ 144 TGRITSMGIEAKIKPDSYTAFSYANRFTK 172
||.||:||||||||||||.||.||||:||
BPUM_1307___y 150 TGMITAMGIEAKIKPDSYAAFCYANRYTK 178
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