Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02357 and BPUM_1306

See DNA alignment / Visit BSNT_02357 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:50
# Commandline: needle
#    -asequence pep-align/BSNT_02357___ykuJ.1.24716.seq
#    -bsequence pep-align/BPUM_1306___ykuJ.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02357___ykuJ-BPUM_1306___ykuJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02357___ykuJ-BPUM_1306___ykuJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02357___ykuJ
# 2: BPUM_1306___ykuJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 80
# Identity:      74/80 (92.5%)
# Similarity:    78/80 (97.5%)
# Gaps:           1/80 ( 1.2%)
# Score: 386.0
# 
#
#=======================================

BSNT_02357___      1 MSQLMGIITRLQSLQETAEAANEPMQRYFEVNGEKICSVKYFEKNQTFEL     50
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BPUM_1306___y      1 MSQLMGIITRLQSLQETAEAANEPAQRYFEVNGEKICSVKYFEKNQTFEL     50

BSNT_02357___     51 TVFQKGEKPNTYPFDNIDMVSIEIFELLQ-     79
                     ||||:|:||||:|||||||:||||||||| 
BPUM_1306___y     51 TVFQQGDKPNTFPFDNIDMISIEIFELLQS     80


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