Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01014 and BPUM_1305

See DNA alignment / Visit BSNT_01014 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:40
# Commandline: needle
#    -asequence pep-align/BSNT_01014.1.24716.seq
#    -bsequence pep-align/BPUM_1305.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01014-BPUM_1305.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01014-BPUM_1305.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01014
# 2: BPUM_1305
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 305
# Identity:      96/305 (31.5%)
# Similarity:   136/305 (44.6%)
# Gaps:          66/305 (21.6%)
# Score: 413.5
# 
#
#=======================================

BSNT_01014         1 ---------------------------------------MMQFFFQSSNF     11
                                                            :..:.|||.||
BPUM_1305          1 MIKRDKRLLIDLPRPDHPDANGAAAVQELLGGKFGEMSTLNNYMFQSFNF     50

BSNT_01014        12 RGKQ--KQYRDLLRGIFLEEIAHVELVQNTINALLDES--GGEGVGSQGT     57
                     |||:  |.:.||:..|..||..|||||...:|.::..:  ||:      .
BPUM_1305         51 RGKRKLKPFYDLVSSITAEEFGHVELVTTAVNLMITGTTHGGD------P     94

BSNT_01014        58 DQAPLDEAVKHANPHHYIIGAQSSLPVDAGGNPWNGSWVYNHGNLITDLL    107
                     |..|:..||...|..|:|..||:..|.|:...||.|..|::.||||.|||
BPUM_1305         95 DTTPMKAAVDKRNTQHFIQTAQTGYPFDSMAKPWTGENVFSSGNLILDLL    144

BSNT_01014       108 DNLLLESTGVLQKTRIYEMSSNQTFRETLAFLIVRDNAHQNAFAKALE-T    156
                     .|..||......|.|:|||:.:.|.||.:.:|:||...|..|:||||| .
BPUM_1305        145 HNFFLECGARTHKMRVYEMTDHPTAREMIGYLLVRGGVHVVAYAKALEVA    194

BSNT_01014       157 LGVEWAKLLPVPNYDINKYPECRKYVELGYHNAQFNFR-LDETRIDEIYQ    205
                     .||:..|:||:||.|...:...||:.:...|...:.|. .|...|::|::
BPUM_1305        195 TGVDVGKMLPIPNLDNKYFDSARKFEDQNIHTKLYTFSDTDYKDINKIWK    244

BSNT_01014       206 GKSPSRNGGELQVID-PPAGFPVPVLPEIPNEHSPGLGDMNA--------    246
                     |..|. :|..|.||: .|.|.|||...|:|.|.:||:...:.        
BPUM_1305        245 GSHPI-DGKPLTVIEGTPQGAPVPDYRELPEEFAPGISKEDFDEIAKRLM    293

BSNT_01014       246 -----    246
                          
BPUM_1305        294 RSAGL    298


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