Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02353 and BPUM_1302

See DNA alignment / Visit BSNT_02353 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:50
# Commandline: needle
#    -asequence pep-align/BSNT_02353___ykuE.1.24716.seq
#    -bsequence pep-align/BPUM_1302___ykuE.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02353___ykuE-BPUM_1302___ykuE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02353___ykuE-BPUM_1302___ykuE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02353___ykuE
# 2: BPUM_1302___ykuE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 286
# Identity:     158/286 (55.2%)
# Similarity:   200/286 (69.9%)
# Gaps:           1/286 ( 0.3%)
# Score: 814.0
# 
#
#=======================================

BSNT_02353___      1 MKKMSRRQFLKGMFGALAAGALTAGGGYGYARYLEPHMIETTEHTIKSSL     50
                     ||::||||||||..||...|.|....|||||||:||.||:|...||:.:.
BPUM_1302___y      1 MKQLSRRQFLKGAAGASILGFLATTCGYGYARYIEPRMIDTVSMTIRDAQ     50

BSNT_02353___     51 IPHGFDGFKIVQFSDAHLSDYFTLEDLKTVILTINESKPDLIVFTGDIID    100
                     :|..||.|||.||||.||||.|..::|::|:..||...|||||||||::|
BPUM_1302___y     51 LPASFDQFKIAQFSDVHLSDTFPSKELESVVQQINAESPDLIVFTGDLVD    100

BSNT_02353___    101 NPDTYQHHQAVIPLLRKLNAPFGKLCIYGNHDHGGYGTAVYKSLMTAGGF    150
                     ...:.:.|:.....|.||:||||||.|.||||:|.:|..:|:..|...||
BPUM_1302___y    101 FQASIEEHEKAKAYLTKLHAPFGKLAICGNHDYGPFGIDLYEKTMEDCGF    150

BSNT_02353___    151 TVYRNGYQTLSLADGSKIEIASLDDLMLGNPDYEGTLSRLSDRLFSILLV    200
                     |:.:|....|. .:|:.|:||::||||:..|||:.....:|..||::|||
BPUM_1302___y    151 TICKNDVFPLE-KEGAHIQIATMDDLMMSVPDYDLIKREVSSDLFTLLLV    199

BSNT_02353___    201 HEPDAALKTTDYPVNLQLSGHTHGGQIQLPFYGPIITPPYGKVYTEGMYQ    250
                     |||||||:....|:||||||||||||:||||||||:|.|:|..|.||:|.
BPUM_1302___y    200 HEPDAALELDTIPINLQLSGHTHGGQVQLPFYGPILTAPFGHTYVEGLYG    249

BSNT_02353___    251 TGSTHIYVNRGLGMTRLPLRFLAKPEITVFTLKSTN    286
                     :....||||||||.||||||||||||:|.|||.|..
BPUM_1302___y    250 SYQHRIYVNRGLGTTRLPLRFLAKPELTFFTLSSRI    285


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