Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02350 and BPUM_1300
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:49
# Commandline: needle
# -asequence pep-align/BSNT_02350___ykuC.1.24716.seq
# -bsequence pep-align/BPUM_1300___ykuC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02350___ykuC-BPUM_1300___ykuC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02350___ykuC-BPUM_1300___ykuC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02350___ykuC
# 2: BPUM_1300___ykuC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 430
# Identity: 279/430 (64.9%)
# Similarity: 339/430 (78.8%)
# Gaps: 32/430 ( 7.4%)
# Score: 1528.0
#
#
#=======================================
BSNT_02350___ 1 MDIFKNRNFVRLFFAALASQMGTTVGNMAFAFFLLDRFSSQPSYTTLAEL 50
|||||:|||.||.||:|.|||||
BPUM_1300___y 1 ---------------------------MAFAFYLLDHFSHQPAYATLAEL 23
BSNT_02350___ 51 MYSLPTIFVFLIVGVVADRFDRKKVAENCDWIRAGLTVVLFFTLFTGNIP 100
||||||||||.:|||||||||||||||||||||||||:|||..::..::|
BPUM_1300___y 24 MYSLPTIFVFFMVGVVADRFDRKKVAENCDWIRAGLTIVLFIVIYFNSLP 73
BSNT_02350___ 101 LVFCILFIRSAVTKFFFPAENSLVQAILPKEHYAKAAGLNQMLFSIFMVF 150
|:|.|||||||:||||:|||.|||||||.|:.|||||||||||||:||||
BPUM_1300___y 74 LIFLILFIRSAITKFFYPAEASLVQAILNKDQYAKAAGLNQMLFSLFMVF 123
BSNT_02350___ 151 GVGIGAFMYNTIGIEGAIILDFVSFIISGLLIRSCRIPKEARQPNGAFSW 200
||||||.||.|||:.|||.:|.:|||:||:|||||.||.|||||||...|
BPUM_1300___y 124 GVGIGAIMYKTIGLHGAITIDLISFIVSGILIRSCNIPIEARQPNGQAGW 173
BSNT_02350___ 201 RKTSVKDSINDFREGILYILKNKLLASLIFGFFIFGFVNGGFAVLPMFTM 250
|..::|.|:.||:||||||:|||||||||||||:||.|||.|||||||||
BPUM_1300___y 174 RGMTIKTSLKDFKEGILYIIKNKLLASLIFGFFVFGLVNGAFAVLPMFTM 223
BSNT_02350___ 251 KYGLAPDRYEWHTSVFTIALGFGLLAGSVIGTIISKKVKPHFLMSIPIFI 300
||||:||.:|.|||.||||:|.|||.||::|:|::||||..:|||:||.:
BPUM_1300___y 224 KYGLSPDHFELHTSFFTIAIGAGLLVGSLMGSILAKKVKMQYLMSLPILV 273
BSNT_02350___ 301 AGLLIFVLGYTNILWVYYAAAFALGMCIGPINIAIGGWMPKIVHPKLMGR 350
||:||||||.|:.||::|..:|.:|.||||:||.||||:|:||||:||||
BPUM_1300___y 274 AGILIFVLGSTHTLWLFYVTSFVIGTCIGPVNIVIGGWLPRIVHPRLMGR 323
BSNT_02350___ 351 VSGMQDPFMMFAQSLTLGLVALLFPKFVSNIDYLYYGMGVIILLVFIFYF 400
|||..||..|||||:||||:|:||||.::|:.|:||||||||||||:|||
BPUM_1300___y 324 VSGWVDPLTMFAQSMTLGLIAVLFPKLITNVSYIYYGMGVIILLVFLFYF 373
BSNT_02350___ 401 IALPKYSAQAVEVNVQEAFQEQPKKKARSV 430
..|||:|.:|.:::||...:.|..:
BPUM_1300___y 374 FTLPKFSREADDLDVQRELKGQGAQ----- 398
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