Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02349 and BPUM_1297

See DNA alignment / Visit BSNT_02349 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:49
# Commandline: needle
#    -asequence pep-align/BSNT_02349___ykyB.1.24716.seq
#    -bsequence pep-align/BPUM_1297___ykyB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02349___ykyB-BPUM_1297___ykyB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02349___ykyB-BPUM_1297___ykyB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02349___ykyB
# 2: BPUM_1297___ykyB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 154
# Identity:     118/154 (76.6%)
# Similarity:   138/154 (89.6%)
# Gaps:           1/154 ( 0.6%)
# Score: 651.0
# 
#
#=======================================

BSNT_02349___      1 MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVK     50
                     |||:|:|||::||.||::||:||||||||||||||:||||||||||||::
BPUM_1297___y      1 MDDYAHTKDIEPTAENIAKAIYTVNRHAKTAPNPKFLYLLKKRALQKLLQ     50

BSNT_02349___     51 EGKGKKIGLHFSKNPRFSQQQSDVLISIGDYYFHMPPTKEDFEHLPHLGT    100
                     ||||:|:|||||.||::|||||||||.|||||||:||||||||.|||||.
BPUM_1297___y     51 EGKGRKVGLHFSNNPKYSQQQSDVLIEIGDYYFHLPPTKEDFEFLPHLGN    100

BSNT_02349___    101 LNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLG    150
                     ||||||||||.|||.:||.|||.|||:|||| ...:|:..|.|||||:||
BPUM_1297___y    101 LNQSYRNPKANMSLNRAKQLLQTYVGLKEKP-TATKQKSHYTKPVFKRLG    149

BSNT_02349___    151 ESYF    154
                     ||||
BPUM_1297___y    150 ESYF    153


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