Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02349 and BPUM_1297
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:49
# Commandline: needle
# -asequence dna-align/BSNT_02349___ykyB.1.24716.seq
# -bsequence dna-align/BPUM_1297___ykyB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02349___ykyB-BPUM_1297___ykyB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02349___ykyB-BPUM_1297___ykyB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02349___ykyB
# 2: BPUM_1297___ykyB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 471
# Identity: 340/471 (72.2%)
# Similarity: 340/471 (72.2%)
# Gaps: 15/471 ( 3.2%)
# Score: 1143.0
#
#
#=======================================
BSNT_02349___ 1 ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCT 50
||||||||..||||..||||.|||||..|..|.||.||.|.||||||..|
BPUM_1297___y 1 ATGGACGATTATGCTCATACTAAAGACATAGAACCTACAGCAGAAAACAT 50
BSNT_02349___ 51 TTCAAAAGCAGTTTACACTGTGAACCGCCATGCAAAAACCGCCCCCAACC 100
..|||||||..||||.|||||.|||||||||||.||||||||.||.||.|
BPUM_1297___y 51 CGCAAAAGCCATTTATACTGTTAACCGCCATGCTAAAACCGCACCAAATC 100
BSNT_02349___ 101 CTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAA 150
|.||||..||.|||||..||||||||||.||..||||.||.||..|..||
BPUM_1297___y 101 CCAAATTTCTTTATCTTTTGAAAAAACGTGCGCTGCAGAAACTATTGCAA 150
BSNT_02349___ 151 GAAGGTAAAGGAAAGAAAA-TAGGGCTTCATTTTTCAAAAAATCCAAGGT 199
||||||||||| ||||||| |.||.||.|||||.||.||.|||||.|..|
BPUM_1297___y 151 GAAGGTAAAGG-AAGAAAAGTGGGCCTACATTTCTCTAACAATCCCAAAT 199
BSNT_02349___ 200 TCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGACTACTATTTT 249
..||.|||||.||.||.||||||||.||...|||.|||||.||.||||||
BPUM_1297___y 200 ATAGTCAACAACAGTCCGACGTGCTGATTGAAATTGGAGATTATTATTTT 249
BSNT_02349___ 250 CACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTAC 299
|||.||||.|||||||||||||||||||||..|.|.||.||.||||| |.
BPUM_1297___y 250 CACCTGCCACCAACTAAAGAAGACTTCGAATTTTTGCCACACTTAGG-AA 298
BSNT_02349___ 300 ACTT-AATCAATCGTACCGAAATCCTAAAGCTCAAATGTCTTTAACAAAA 348
|.|| ||||||||.||.||.||.||.|||||..|.|||||.||||....|
BPUM_1297___y 299 ATTTAAATCAATCATATCGCAACCCGAAAGCGAATATGTCATTAAACCGA 348
BSNT_02349___ 349 GCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGT 398
||.||.||.||..|.|||...||||||||..|.||||||||.| |||..
BPUM_1297___y 349 GCAAAGCAACTGCTTCAAACGTATGTCGGTTTAAAAGAAAAAC--CTACC 396
BSNT_02349___ 399 GCC---AAATCGCCAGCAGCCAGCTTA-CCATAAACCGGTCTTTAAAAAA 444
||| ||| ||..|..||..||| .|| ||.||.|||||.|||..|
BPUM_1297___y 397 GCCACAAAA----CAAAAATCACATTATACA-AAGCCCGTCTTCAAACGA 441
BSNT_02349___ 445 CTTGGCGAGAGTTACTTTTAA 465
||.||.||.|||||.||||||
BPUM_1297___y 442 CTCGGGGAAAGTTATTTTTAA 462
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