Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02346 and BPUM_1293

See DNA alignment / Visit BSNT_02346 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:49
# Commandline: needle
#    -asequence pep-align/BSNT_02346.1.24716.seq
#    -bsequence pep-align/BPUM_1293.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02346-BPUM_1293.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02346-BPUM_1293.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02346
# 2: BPUM_1293
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 53
# Identity:      24/53 (45.3%)
# Similarity:    33/53 (62.3%)
# Gaps:           3/53 ( 5.7%)
# Score: 126.0
# 
#
#=======================================

BSNT_02346         1 MGTLVIFKENEMTVLEDISEETYLNMKKESADLQEEHPPYLIWHEDLHFD     50
                     |||:::...|||||:|||.|..:|:||.   ||..:...|:.|:||....
BPUM_1293          1 MGTVILLNNNEMTVIEDICEADFLDMKH---DLSNDDTAYISWYEDYDTA     47

BSNT_02346        51 YGY     53
                     |||
BPUM_1293         48 YGY     50


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