Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02346 and BPUM_1293
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:49
# Commandline: needle
# -asequence dna-align/BSNT_02346.1.24716.seq
# -bsequence dna-align/BPUM_1293.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02346-BPUM_1293.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02346-BPUM_1293.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02346
# 2: BPUM_1293
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 167
# Identity: 106/167 (63.5%)
# Similarity: 106/167 (63.5%)
# Gaps: 19/167 (11.4%)
# Score: 267.0
#
#
#=======================================
BSNT_02346 1 ATGGGTACCTTAGTAATATTTAAAGAA-AACGAAATGACTGTTTTAGAGG 49
|||||.||..|..||.|| |||||.|| ||.|||||||||||..|.||.|
BPUM_1293 1 ATGGGAACTGTCATACTA-TTAAATAACAATGAAATGACTGTGATTGAAG 49
BSNT_02346 50 ATATCAGTGAAGAAACTTACCTGAATATGAAGA-AAGAATCAGCTGACCT 98
||||..|.|||| ||||.|.|..||| |.|||.|| |||..|
BPUM_1293 50 ATATTTGCGAAG--------CTGATTTTTTAGACATGAAGCA--TGATTT 89
BSNT_02346 99 -TCAAGAAGAGCATCCTCCGTATCTGATTTGGCACGAAGACCTT--CATT 145
|||| |.||..||.|..|.|||.|...||||.|.||||| || .||.
BPUM_1293 90 GTCAA-ATGATGATACAGCTTATATCTCTTGGTATGAAGA--TTACGATA 136
BSNT_02346 146 TTGATTATGGCTATTAA 162
.||.||||||.||||.|
BPUM_1293 137 CTGCTTATGGATATTGA 153
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