Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02346 and BPUM_1293

See Amino acid alignment / Visit BSNT_02346 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:49
# Commandline: needle
#    -asequence dna-align/BSNT_02346.1.24716.seq
#    -bsequence dna-align/BPUM_1293.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02346-BPUM_1293.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02346-BPUM_1293.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02346
# 2: BPUM_1293
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 167
# Identity:     106/167 (63.5%)
# Similarity:   106/167 (63.5%)
# Gaps:          19/167 (11.4%)
# Score: 267.0
# 
#
#=======================================

BSNT_02346         1 ATGGGTACCTTAGTAATATTTAAAGAA-AACGAAATGACTGTTTTAGAGG     49
                     |||||.||..|..||.|| |||||.|| ||.|||||||||||..|.||.|
BPUM_1293          1 ATGGGAACTGTCATACTA-TTAAATAACAATGAAATGACTGTGATTGAAG     49

BSNT_02346        50 ATATCAGTGAAGAAACTTACCTGAATATGAAGA-AAGAATCAGCTGACCT     98
                     ||||..|.||||        ||||.|.|..||| |.|||.||  |||..|
BPUM_1293         50 ATATTTGCGAAG--------CTGATTTTTTAGACATGAAGCA--TGATTT     89

BSNT_02346        99 -TCAAGAAGAGCATCCTCCGTATCTGATTTGGCACGAAGACCTT--CATT    145
                      |||| |.||..||.|..|.|||.|...||||.|.|||||  ||  .||.
BPUM_1293         90 GTCAA-ATGATGATACAGCTTATATCTCTTGGTATGAAGA--TTACGATA    136

BSNT_02346       146 TTGATTATGGCTATTAA    162
                     .||.||||||.||||.|
BPUM_1293        137 CTGCTTATGGATATTGA    153


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