Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02344 and BPUM_1291
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:49
# Commandline: needle
# -asequence pep-align/BSNT_02344___patA.1.24716.seq
# -bsequence pep-align/BPUM_1291___patA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02344___patA-BPUM_1291___patA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02344___patA-BPUM_1291___patA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02344___patA
# 2: BPUM_1291___patA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 393
# Identity: 304/393 (77.4%)
# Similarity: 349/393 (88.8%)
# Gaps: 4/393 ( 1.0%)
# Score: 1598.0
#
#
#=======================================
BSNT_02344___ 1 MEHLLNPKAREIEISGIRKFSNLVAQHEDVISLTIGQPDFFTPHHVKAAA 50
|||||||:.::|||||||.|||||:.:|||:|||||||||:||||||.||
BPUM_1291___p 1 MEHLLNPRVKDIEISGIRTFSNLVSSYEDVVSLTIGQPDFYTPHHVKTAA 50
BSNT_02344___ 51 KKAIDENVTSYTPNAGYLELRQAVQLYMKKKADFNYDAESEIIITTGASQ 100
|.|||||.||||.|||:||||||:|.|:|||.:.:|:||||||:||||||
BPUM_1291___p 51 KAAIDENFTSYTHNAGFLELRQAIQHYIKKKVNLDYEAESEIIVTTGASQ 100
BSNT_02344___ 101 AIDAAFRTILSPGDEVIMPGPIYPGYEPIINLCGAKPVIVDTTSHGFKLT 150
|||||||||||.|||||:|||:||||||||.:||.|||.:|||:.||||.
BPUM_1291___p 101 AIDAAFRTILSEGDEVILPGPVYPGYEPIIRMCGGKPVHIDTTNAGFKLN 150
BSNT_02344___ 151 ARLIEDALTPNTKCVVLPYPSNPTGVTLSEEELKSIAALLKGRNVFVLSD 200
|:|||||||.||||||||||||||||||||||||.||.||:|:::|:|||
BPUM_1291___p 151 AKLIEDALTENTKCVVLPYPSNPTGVTLSEEELKEIAQLLEGKDIFILSD 200
BSNT_02344___ 201 EIYSELTYDRPHYSIANHLRDQTIVINGLSKSHSMTGWRIGFLFAPKDIA 250
|||||||:||||:|||:.|::||||||||||||||||||||||||...||
BPUM_1291___p 201 EIYSELTFDRPHHSIASFLKEQTIVINGLSKSHSMTGWRIGFLFASAPIA 250
BSNT_02344___ 251 KHILKVHQYNVSCASSISQKAALEAVTNGFDDALIMREQYKKRLDYVYDR 300
||:||||||||||||::||||||||||||.||||||||||||||||||||
BPUM_1291___p 251 KHVLKVHQYNVSCASAVSQKAALEAVTNGVDDALIMREQYKKRLDYVYDR 300
BSNT_02344___ 301 LVSMGLDVVKPSGAFYIFPSIKSFGMTSFDFSMALLEDAGVALVPGSSFS 350
|:||||.|:||||||||||||:||||:||||.|.|||...:|:||||:||
BPUM_1291___p 301 LISMGLPVIKPSGAFYIFPSIESFGMSSFDFCMELLESTRLAVVPGSAFS 350
BSNT_02344___ 351 TYGEGYVRLSFACSMDTLREGLDRLELFVLKKREAMQTINNGV 393
..||.|||||:|.|::||:|||||||.|||:||....|.
BPUM_1291___p 351 PLGERYVRLSYAYSLETLKEGLDRLEQFVLEKRSIHLTD---- 389
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