Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02340 and BPUM_1289
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:48
# Commandline: needle
# -asequence pep-align/BSNT_02340___ykuA.1.24716.seq
# -bsequence pep-align/BPUM_1289.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02340___ykuA-BPUM_1289.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02340___ykuA-BPUM_1289.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02340___ykuA
# 2: BPUM_1289
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 717
# Identity: 426/717 (59.4%)
# Similarity: 547/717 (76.3%)
# Gaps: 21/717 ( 2.9%)
# Score: 2255.0
#
#
#=======================================
BSNT_02340___ 1 ---MTEIGREPKKKSKGNRAIRMNLFFLAVFVLFTALIFKLGVVQIVEGE 47
....|...:||.|...|.|:||||.|||.||..|:.||||:|||.||
BPUM_1289 1 MGEKQHQGGAEQKKIKRRNAWRINLFFFAVFSLFAVLVIKLGVLQIVNGE 50
BSNT_02340___ 48 QHEEDAEKSNAKTAYYPAPRGKMYDRNQKVAVDNQSVPEIVYVSTSSTKT 97
.:::.|.::..|||.||:|||||||...:|.|||:|||.|||.|.|..|.
BPUM_1289 51 DYKKQANRTEVKTASYPSPRGKMYDARGRVVVDNESVPAIVYTSESGVKA 100
BSNT_02340___ 98 EDKIKTAKRLASFIHIDTEFLKERDLRDYWIAAHPKKAAALLKESE-SNL 146
|||||.|::||::|.:||.||:|||:||:|:|:|||:|..|:.::| ..|
BPUM_1289 101 EDKIKVARKLATYIKMDTNFLRERDIRDFWLASHPKEADKLISKAEQKKL 150
BSNT_02340___ 147 KGDQAYKLQIERVPDQELKAIQQDDEEMETAAIYTRFSSGNAYEPQIVKA 196
|....|.||:||||.:|:|:|:::.||...||||.||:.|.|:|||||||
BPUM_1289 151 KAKDVYPLQVERVPKEEVKSIEKNAEEKAVAAIYRRFTGGYAFEPQIVKA 200
BSNT_02340___ 197 MNPNKSNSNGKNGALLDEKKNSSQRPKNDLTYDEISIVSEHLEELPGIDI 246
|:||:.....:..|||||.|.|.|.....|||:|||:|||||:||||:::
BPUM_1289 201 MDPNEEKKGDEKVALLDETKESKQTSSVSLTYEEISLVSEHLDELPGVNV 250
BSNT_02340___ 247 VNDWTRKYPYDKTLYSVFGGVTTPDQGLLSDRKDFYLTRGYANNDRVGKS 296
:|||||||||:||||:|.||||||:||::.:|:|:|:.|||:.|||||||
BPUM_1289 251 INDWTRKYPYEKTLYNVLGGVTTPEQGIIKEREDYYMARGYSRNDRVGKS 300
BSNT_02340___ 297 YLEYQYEEYLNSHKEKVEYVEDNKGNVVSQKTID-----KGSRGYDLQLS 341
|||||||::||..|..|:|.: |..|.:| :|.||.||.|:
BPUM_1289 301 YLEYQYEDFLNPEKATVQYTQ------VGGKLLDEIKRTEGRRGLDLALT 344
BSNT_02340___ 342 FDMELQAKVEKIIEEEVRNSRARGNYMLDRAFAVMMDPNNGDILSMAGKK 391
||||||.:|:||:|.|:|::.|| |||:||||.||||||.||:|:|:|||
BPUM_1289 345 FDMELQKEVDKIVESELRSASAR-NYMMDRAFVVMMDPNTGDVLAMSGKK 393
BSNT_02340___ 392 IDLKTNKIEDYAIGAFTTQYEMGSAVKGATVLAGYQDGIPHYKYFVDTPL 441
:| ...:.|||||.|||||||||.|||||||.|||||:.|.:.::||||
BPUM_1289 394 MD--GRDVTDYAIGTFTTQYEMGSVVKGATVLGGYQDGMSHNQSYMDTPL 441
BSNT_02340___ 442 YLAGYGNKPKKSYMNMGTINELTALQKSSNVYMFNVAMHIAGVTYKPHGP 491
:.||.| ||||||.::|.:|:|.|||||||||||:|||.:||:||:.:||
BPUM_1289 442 FFAGSG-KPKKSYNDLGWVNDLRALQKSSNVYMFHVAMRMAGITYQQNGP 490
BSNT_02340___ 492 LPADQKDLNKMRNYYSQFGLGVKTGIDLPQESAGMQTTPDAVGGLILDLA 541
|||..:.|.||||||:||||||||||||||||:||||.|..||||:||.|
BPUM_1289 491 LPARPEHLQKMRNYYAQFGLGVKTGIDLPQESSGMQTHPKTVGGLLLDEA 540
BSNT_02340___ 542 IGQYDTYTPLQMAQYISSIANGGYRIQPRIVTSVHEPSKKEGLGKTIEQR 591
|||||||||||:|||:|:|||||.|:|||:|.|||.|:||:.:|..:::.
BPUM_1289 541 IGQYDTYTPLQVAQYMSTIANGGNRVQPRVVKSVHLPTKKDEVGPVVKKY 590
BSNT_02340___ 592 KPNILNKINNSESDIQQVKTGMKLVT-TSGTAKNTFTE-DVSGKTGTAET 639
:|.:||.||||::||.:||.|:|:|| |.|||...|.: ||:||||||:|
BPUM_1289 591 EPKVLNTINNSKADIDRVKMGLKMVTSTGGTAAGRFGQHDVAGKTGTAQT 640
BSNT_02340___ 640 FYYGTNRNWWGKKTYNLTFVGYYPSKNPKVAFSVVVPSVNDDDKINKIIA 689
||||.||:|||..||||||.|||||.|||||||||.|.|:|.|.:.|.|.
BPUM_1289 641 FYYGANRSWWGNATYNLTFGGYYPSSNPKVAFSVVTPYVSDKDSVIKTIP 690
BSNT_02340___ 690 KRAIHAYAELEKKHSKK 706
.:.:..|.||:||:.|:
BPUM_1289 691 SKIVDKYVELQKKYEKQ 707
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