Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02337 and BPUM_1286

See DNA alignment / Visit BSNT_02337 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:48
# Commandline: needle
#    -asequence pep-align/BSNT_02337___ykwC.1.24716.seq
#    -bsequence pep-align/BPUM_1286___ykwC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02337___ykwC-BPUM_1286___ykwC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02337___ykwC-BPUM_1286___ykwC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02337___ykwC
# 2: BPUM_1286___ykwC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 290
# Identity:     227/290 (78.3%)
# Similarity:   262/290 (90.3%)
# Gaps:           2/290 ( 0.7%)
# Score: 1218.0
# 
#
#=======================================

BSNT_02337___      1 --MKKTIGFIGLGVMGKSMASHILNDGHPVLVYTRTKEKAESILQKGAIW     48
                       ..||:||||:||||:|||.|:::.|:.||||||||.||::::||||:|
BPUM_1286___y      1 MTQIKTVGFIGIGVMGRSMAEHLMDAGYEVLVYTRTKAKADALIQKGALW     50

BSNT_02337___     49 KDTVKDLSKEADVIITMVGYPSDVEEVYFGSNGIIENAKEGAYLIDMTTS     98
                     |..||::::.||.:||||||||||||:|.|..|::.:|..|.||||||||
BPUM_1286___y     51 KPEVKEIAQHADAVITMVGYPSDVEEIYLGEEGLVAHATPGTYLIDMTTS    100

BSNT_02337___     99 KPSLAKKIAEAAKEKALFALDAPVSGGDVGAQNGTLAIMVGGEKEAFEAC    148
                     ||.|||:|.|.||||.|||||||||||||||:|||||||:||||.|:|||
BPUM_1286___y    101 KPQLAKEIEEKAKEKGLFALDAPVSGGDVGAKNGTLAIMIGGEKSAYEAC    150

BSNT_02337___    149 MPIFSLMGENIQYQGSAGSGQHTKMCNQIAIAAGMIGVAEAMAYAQKSGL    198
                     :|:|..|||||||||.|||||||||||||||||||:|||||||||:||||
BPUM_1286___y    151 LPLFEKMGENIQYQGPAGSGQHTKMCNQIAIAAGMVGVAEAMAYAEKSGL    200

BSNT_02337___    199 EPENVLKSITTGAAGSWSLSNLAPRMLQGNFEPGFYVKHFIKDMGIALEE    248
                     :||:|||||||||||||||||||||||:|:||||||||||||||||||||
BPUM_1286___y    201 DPEHVLKSITTGAAGSWSLSNLAPRMLKGDFEPGFYVKHFIKDMGIALEE    250

BSNT_02337___    249 AELMGEEMPGLSLAKSLYDKLAAQGEENSGTQSIYKLWVK    288
                     ||||||||||||||||||:||:.|||||||||||||||||
BPUM_1286___y    251 AELMGEEMPGLSLAKSLYEKLSEQGEENSGTQSIYKLWVK    290


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.