Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02332 and BPUM_1282

See DNA alignment / Visit BSNT_02332 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:48
# Commandline: needle
#    -asequence pep-align/BSNT_02332___splA.1.24716.seq
#    -bsequence pep-align/BPUM_1282___splA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02332___splA-BPUM_1282___splA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02332___splA-BPUM_1282___splA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02332___splA
# 2: BPUM_1282___splA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 80
# Identity:      50/80 (62.5%)
# Similarity:    61/80 (76.2%)
# Gaps:           6/80 ( 7.5%)
# Score: 271.0
# 
#
#=======================================

BSNT_02332___      1 -MSNQFNAGDTVYVIYRNPHAANVAHIKEAEIVHHPYHEGELSLFIYETY     49
                      ..:.:..||.||||||||||||||.|||||||.|||:|.||:||:.|||
BPUM_1282___s      1 MPFSDYKPGDQVYVIYRNPHAANVAQIKEAEIVSHPYNEEELALFLLETY     50

BSNT_02332___     50 HPFAEDDAVFASYEEAKSLYKELFDIDPYE     79
                     ||.|.|||||.:||||::||::||:     
BPUM_1282___s     51 HPLAPDDAVFPTYEEAEALYQDLFE-----     75


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.