Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02332 and BPUM_1282

See Amino acid alignment / Visit BSNT_02332 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:48
# Commandline: needle
#    -asequence dna-align/BSNT_02332___splA.1.24716.seq
#    -bsequence dna-align/BPUM_1282___splA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02332___splA-BPUM_1282___splA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02332___splA-BPUM_1282___splA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02332___splA
# 2: BPUM_1282___splA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 249
# Identity:     165/249 (66.3%)
# Similarity:   165/249 (66.3%)
# Gaps:          30/249 (12.0%)
# Score: 530.5
# 
#
#=======================================

BSNT_02332___      1 ------ATGTCAAACCAATTTAACGCAGGAGATACTGTTTATGTGATCTA     44
                           .|.|||.||   |.|||..|.||.|||...||.||||||||.||
BPUM_1282___s      1 TTGCCTTTCTCAGAC---TATAAACCGGGTGATCAAGTATATGTGATTTA     47

BSNT_02332___     45 CAGAAATCCGCACGCCGCCAATGTAGCTCACATAAAGGAAGCCGAAATTG     94
                     ..|||||||.||.||.||.||.|||||.||.||.||.|||||.|||||||
BPUM_1282___s     48 TCGAAATCCACATGCAGCTAACGTAGCACAAATTAAAGAAGCAGAAATTG     97

BSNT_02332___     95 -TGCACCATCCATACCATGAAGGCGAGCTTTCCCTGTTTATTTA--TGAA    141
                      |.|| |||||||||.||||||..||||||.||||.||  ||||  ||||
BPUM_1282___s     98 TTTCA-CATCCATACAATGAAGAGGAGCTTGCCCTCTT--TTTACTTGAA    144

BSNT_02332___    142 ACCTATCACCCGTTCGCAGAGGACGATGCTGTGTTTGCAAGCTATGAAGA    191
                     ||.||.||.||.||.||....||.|||||.||.|||.|||..||||||||
BPUM_1282___s    145 ACGTACCATCCCTTAGCTCCAGATGATGCGGTCTTTCCAACATATGAAGA    194

BSNT_02332___    192 AGCTAAATCGCTTTACAAAGAACTCTTTGATATTGATCCATATGAGTAA    240
                     |||..||.|.|||||..||||    ||||           |.|||.|||
BPUM_1282___s    195 AGCAGAAGCTCTTTATCAAGA----TTTG-----------TTTGAATAA    228


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