Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02316 and BPUM_1274
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:47
# Commandline: needle
# -asequence pep-align/BSNT_02316___ykvV.1.24716.seq
# -bsequence pep-align/BPUM_1274___spoIVH.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02316___ykvV-BPUM_1274___spoIVH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02316___ykvV-BPUM_1274___spoIVH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02316___ykvV
# 2: BPUM_1274___spoIVH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 174
# Identity: 78/174 (44.8%)
# Similarity: 110/174 (63.2%)
# Gaps: 21/174 (12.1%)
# Score: 410.5
#
#
#=======================================
BSNT_02316___ 1 ---------MLTKRLLTIYIMLLGLIAWFPCAAQAEEKQPAVPAVFLMKT 41
:| ::|:.::|:| ::||.|:|.........|
BPUM_1274___s 1 MNRKYLPASLL---MMTLLLLLIG--------SEAEAKEPVKAPRIEAPT 39
BSNT_02316___ 42 IEGEDISIPNKGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVT 91
:.||...||.||:||||||||:|||.||.|||.|......:.|| |.::|
BPUM_1274___s 40 LTGETQMIPPKGKKTILHFWTTWCPSCKMELPVFDQIVKENQSD-VDILT 88
BSNT_02316___ 92 VNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYHIITIPTSFLLN 141
|||:.:||::..|..|:|..|.|||:|||.:|::||:|.||||||:||:|
BPUM_1274___s 89 VNLLGAEQSKHAVAQFVKDKKFTFPVVLDERGDMMKKYQIITIPTTFLIN 138
BSNT_02316___ 142 EKGEIEKTKIGPMTAEQLKEWTEE 165
|||||.|..:||:|.:|:||||..
BPUM_1274___s 139 EKGEIVKNHVGPLTKKQIKEWTNF 162
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