Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02314 and BPUM_1272
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:46
# Commandline: needle
# -asequence pep-align/BSNT_02314___ykvT.1.24716.seq
# -bsequence pep-align/BPUM_1272___ykvT.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02314___ykvT-BPUM_1272___ykvT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02314___ykvT-BPUM_1272___ykvT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02314___ykvT
# 2: BPUM_1272___ykvT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 224
# Identity: 111/224 (49.6%)
# Similarity: 154/224 (68.8%)
# Gaps: 23/224 (10.3%)
# Score: 496.5
#
#
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BSNT_02314___ 1 MTTKFTALAVFLLCFMPAAKIEHTQ------ASLLSAKKTKHEEAKWLTH 44
|....|||.|.|: .:.|.|:|:.| :..||....||| |::
BPUM_1272___y 1 MMKIHTALFVILM-LVAAMKMENIQEQQGTLSHELSQAPVKHE----LSY 45
BSNT_02314___ 45 IDRNTNES-FPSLSADKDKKITPIK-LSAHTE-------KKEKDKPDKTN 85
|:::.::. .|:.| ::|:...:| ||..|| :|::.|.:.||
BPUM_1272___y 46 INQDDHDQVIPAFS--EEKRQPKVKMLSTSTEEKSSKPKQKKRVKSETTN 93
BSNT_02314___ 86 DEK-ETYTQSEKELLSRLVHAEAKGESYKGKVAVASVVLNRTEKKGFPDT 134
:|. :.|:..|.||||||||||||||||.||.|||||||||.|.:.|||:
BPUM_1272___y 94 EESAKRYSNEEMELLSRLVHAEAKGESYAGKKAVASVVLNRVEHRSFPDS 143
BSNT_02314___ 135 IRGVIYQKNAFEPVANGSINQKPDKESIEAAEEALSSKNRETDAIFFYNP 184
::|||||:|||:||:||||:.|.|::|::|.::.:...:|.|.||:||||
BPUM_1272___y 144 VKGVIYQRNAFQPVSNGSIHDKADQDSVKAVKQVVKEHDRTTKAIYFYNP 193
BSNT_02314___ 185 KTASDNWIRSRKIVEKIGRHVFAV 208
|||:|||||||||||:||||||||
BPUM_1272___y 194 KTATDNWIRSRKIVERIGRHVFAV 217
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