Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02312 and BPUM_1271

See DNA alignment / Visit BSNT_02312 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:46
# Commandline: needle
#    -asequence pep-align/BSNT_02312.1.24716.seq
#    -bsequence pep-align/BPUM_1271.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02312-BPUM_1271.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02312-BPUM_1271.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02312
# 2: BPUM_1271
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 65
# Identity:      34/65 (52.3%)
# Similarity:    47/65 (72.3%)
# Gaps:           1/65 ( 1.5%)
# Score: 188.0
# 
#
#=======================================

BSNT_02312         1 MLRPEEITEMIEQLRTGAINELRVQKEHFLDFRAVLSKQDDFKHFRGIAQ     50
                      :..|:|..::|.||.|...::.:||:.||.||::|..|||||||||||:
BPUM_1271          1 -MTEEQILTILESLRNGTEKQVNIQKDDFLTFRSILVNQDDFKHFRGIAK     49

BSNT_02312        51 QGGDVIFQYLEQPRS     65
                     .||||||:||.:.||
BPUM_1271         50 HGGDVIFEYLTEARS     64


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