Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02309 and BPUM_1266

See DNA alignment / Visit BSNT_02309 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:46
# Commandline: needle
#    -asequence pep-align/BSNT_02309___ykvM.1.24716.seq
#    -bsequence pep-align/BPUM_1266___queF.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02309___ykvM-BPUM_1266___queF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02309___ykvM-BPUM_1266___queF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02309___ykvM
# 2: BPUM_1266___queF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 165
# Identity:     152/165 (92.1%)
# Similarity:   159/165 (96.4%)
# Gaps:           0/165 ( 0.0%)
# Score: 849.0
# 
#
#=======================================

BSNT_02309___      1 MTTRKESELEGVTLLGNQGTNYLFEYAPDVLESFPNKHVNRDYFVKFNCP     50
                     |||||..|||||||||||||||||:|||.|||:|||||.|||||||||||
BPUM_1266___q      1 MTTRKPEELEGVTLLGNQGTNYLFDYAPQVLETFPNKHTNRDYFVKFNCP     50

BSNT_02309___     51 EFTSLCPKTGQPDFATIYISYIPDEKMVESKSLKLYLFSFRNHGDFHEDC    100
                     |||||||:||||||||:||||||:|.||||||||||||||||||||||||
BPUM_1266___q     51 EFTSLCPQTGQPDFATVYISYIPNEIMVESKSLKLYLFSFRNHGDFHEDC    100

BSNT_02309___    101 MNIIMNDLIELMDPRYIEVWGKFTPRGGISIDPYTNYGKPGTKYEKMAEY    150
                     |||||||||||||||||||||||||||||||||||||||||||||:||.|
BPUM_1266___q    101 MNIIMNDLIELMDPRYIEVWGKFTPRGGISIDPYTNYGKPGTKYEEMASY    150

BSNT_02309___    151 RMMNHDLYPETIDNR    165
                     ||||||:||||||||
BPUM_1266___q    151 RMMNHDMYPETIDNR    165


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.