Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02309 and BPUM_1266
See
Amino acid alignment /
Visit
BSNT_02309 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:46
# Commandline: needle
# -asequence dna-align/BSNT_02309___ykvM.1.24716.seq
# -bsequence dna-align/BPUM_1266___queF.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02309___ykvM-BPUM_1266___queF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02309___ykvM-BPUM_1266___queF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02309___ykvM
# 2: BPUM_1266___queF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 499
# Identity: 404/499 (81.0%)
# Similarity: 404/499 (81.0%)
# Gaps: 2/499 ( 0.4%)
# Score: 1628.0
#
#
#=======================================
BSNT_02309___ 1 ATGACGACAAGAAAAGAATCAGAATTAGAAGGTGTAACATTGTTAGGCAA 50
|||||||||||||||..|..||||||||||||.||.||.||..||||.||
BPUM_1266___q 1 ATGACGACAAGAAAACCAGAAGAATTAGAAGGCGTCACTTTACTAGGAAA 50
BSNT_02309___ 51 CCAAGGTACAAATTATTTGTTCGAATATGCACCGGACGTGCTGGAATCCT 100
.|||||.||.|||||||||||.||.|||||||||.|.|||||.|||.|.|
BPUM_1266___q 51 TCAAGGAACCAATTATTTGTTTGATTATGCACCGCAAGTGCTTGAAACAT 100
BSNT_02309___ 101 TCCCGAATAAACATGTAAACCGTGATTACTTTGTAAAATTCAATTGTCCG 150
|.||||||||||||..|||..|.|||||.|||||.|||||.||.||.||.
BPUM_1266___q 101 TTCCGAATAAACATACAAATAGAGATTATTTTGTGAAATTTAACTGCCCA 150
BSNT_02309___ 151 GAATTCACATCTTTATGTCCTAAAACAGGACAGCCTGACTTTGCGACAAT 200
|||||.||.||..|.|||||..|||||||.|||||.||.|||||||||.|
BPUM_1266___q 151 GAATTTACGTCACTTTGTCCGCAAACAGGTCAGCCGGATTTTGCGACAGT 200
BSNT_02309___ 201 CTACATCAGCTACATTCCTGATGAAAAAATGGTTGAAAGCAAATCATTAA 250
.||.||||||||.|||||..|.||||..|||||.|||||.||||||||||
BPUM_1266___q 201 TTATATCAGCTATATTCCAAACGAAATCATGGTCGAAAGTAAATCATTAA 250
BSNT_02309___ 251 AGCTGTATCTATTCAGCTTCAGAAACCATGGTGACTTCCACGAAGACTGC 300
|..|||||.|.|||||||||.|.|||||||||||.|||||.||.||.||.
BPUM_1266___q 251 AATTGTATTTGTTCAGCTTCCGTAACCATGGTGATTTCCATGAGGATTGT 300
BSNT_02309___ 301 ATGAACATCATCATGAATGA-CTTGATTGAATTAATGGACCCGCGCTACA 349
|||||.||.||.|||||.|| ||| ||||||||.|||||.||..|.||||
BPUM_1266___q 301 ATGAATATTATTATGAACGATCTT-ATTGAATTGATGGATCCAAGATACA 349
BSNT_02309___ 350 TCGAAGTATGGGGCAAATTCACGCCAAGAGGCGGAATTTCCATTGACCCG 399
|.|||||||||||||||||.||.|||||||||||.|||||.|||||||||
BPUM_1266___q 350 TTGAAGTATGGGGCAAATTTACTCCAAGAGGCGGTATTTCAATTGACCCG 399
BSNT_02309___ 400 TACACTAACTACGGAAAGCCTGGCACGAAGTATGAAAAAATGGCCGAATA 449
|||||.|||||.|||||.|||||.||.||.||||||.|||||||...|||
BPUM_1266___q 400 TACACAAACTATGGAAAACCTGGTACCAAATATGAAGAAATGGCGTCATA 449
BSNT_02309___ 450 CCGTATGATGAACCATGATTTGTATCCGGAGACGATTGATAATCGTTAA 498
.||||||||||||||||||.|||||||.||.||||||||||||||.|||
BPUM_1266___q 450 TCGTATGATGAACCATGATATGTATCCTGAAACGATTGATAATCGCTAA 498
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.