Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02308 and BPUM_1265

See DNA alignment / Visit BSNT_02308 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:46
# Commandline: needle
#    -asequence pep-align/BSNT_02308___ykvL.1.24716.seq
#    -bsequence pep-align/BPUM_1265___queE.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02308___ykvL-BPUM_1265___queE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02308___ykvL-BPUM_1265___queE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02308___ykvL
# 2: BPUM_1265___queE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 243
# Identity:     183/243 (75.3%)
# Similarity:   201/243 (82.7%)
# Gaps:           0/243 ( 0.0%)
# Score: 954.0
# 
#
#=======================================

BSNT_02308___      1 MAKGIPVLEIFGPTIQGEGMVIGQKTMFVRTAGCDYSCSWCDSAFTWDGS     50
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BPUM_1265___q      1 MAKAIPVLEIFGPTIQGEGMVIGQKTMFVRTAGCDYSCSWCDSAFTWDGS     50

BSNT_02308___     51 AKKDIRWMTAEEIFAELKDIGGDAFSHVTISGGNPALLKQLDVFIELLKE    100
                     ||.||:|:.||:|..|||.|||.|||||||||||||||||::..|:||.|
BPUM_1265___q     51 AKHDIQWLHAEDIVKELKRIGGQAFSHVTISGGNPALLKQMESLIDLLHE    100

BSNT_02308___    101 NNIRAALETQGTVYQDWFTLIDDLTISPKPPSSKMVTNFQKLDHILTSLQ    150
                     ..|..|||||||:|||||..|||||||||||||.|.|:|.||..|:..|:
BPUM_1265___q    101 KGIDTALETQGTMYQDWFLKIDDLTISPKPPSSNMKTDFAKLTRIIDELK    150

BSNT_02308___    151 ENDRQHAVSLKVVIFNDEDLEFAKMVHKRYPGIPFYLQVGNDDVHTTDDQ    200
                     ..:|....|||||||:|.||.:||.||.:||.:||||||||||..|.||.
BPUM_1265___q    151 NGNRLEHASLKVVIFDDHDLAYAKDVHAKYPELPFYLQVGNDDTTTGDDA    200

BSNT_02308___    201 SLITHLLGKYEALVDKVAVDAELNLVRVLPQLHTLLWGNKRGV    243
                     ||:||||.|||||||:||.|.:||.||||||||||||||||||
BPUM_1265___q    201 SLLTHLLKKYEALVDQVAQDPDLNRVRVLPQLHTLLWGNKRGV    243


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