Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02307 and BPUM_1264

See DNA alignment / Visit BSNT_02307 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:46
# Commandline: needle
#    -asequence pep-align/BSNT_02307___ykvK.1.24716.seq
#    -bsequence pep-align/BPUM_1264___queD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02307___ykvK-BPUM_1264___queD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02307___ykvK-BPUM_1264___queD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02307___ykvK
# 2: BPUM_1264___queD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 146
# Identity:     118/146 (80.8%)
# Similarity:   129/146 (88.4%)
# Gaps:           0/146 ( 0.0%)
# Score: 655.0
# 
#
#=======================================

BSNT_02307___      1 MLSQIYPQAQHPYSFELNKDMHISAAHFIPRESAGACSRVHGHTYTVNIT     50
                     ||||||||..||||||||||||||||||||||.|||||||||||||:|||
BPUM_1264___q      1 MLSQIYPQTNHPYSFELNKDMHISAAHFIPREDAGACSRVHGHTYTINIT     50

BSNT_02307___     51 VAGDELDDSGFLVNFSVLKKLVHGNYDHTLLNDHEDFSQDDRYSLPTTEV    100
                     :|||||||||||||||.||||:||.||||||||||:||..:.|::|||||
BPUM_1264___q     51 IAGDELDDSGFLVNFSTLKKLIHGQYDHTLLNDHEEFSSTNPYAMPTTEV    100

BSNT_02307___    101 VAKTIYDNVQAYLDTLENKPTCVQVFVRETPTSYCVYRPKKGGLNG    146
                     ||||::|.|..||.||.|||.||||||||||||||:||||:...||
BPUM_1264___q    101 VAKTVHDKVADYLSTLANKPVCVQVFVRETPTSYCIYRPKRVEHNG    146


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