Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02307 and BPUM_1264
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:46
# Commandline: needle
# -asequence dna-align/BSNT_02307___ykvK.1.24716.seq
# -bsequence dna-align/BPUM_1264___queD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02307___ykvK-BPUM_1264___queD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02307___ykvK-BPUM_1264___queD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02307___ykvK
# 2: BPUM_1264___queD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 450
# Identity: 329/450 (73.1%)
# Similarity: 329/450 (73.1%)
# Gaps: 18/450 ( 4.0%)
# Score: 1138.5
#
#
#=======================================
BSNT_02307___ 1 TTGTTATCTCAAATTTATCCGCAGGCCCAGCATCCTTATTCGTTTGAACT 50
.||.|.||||||||.|||||.||..|..|.|||||.||.||.||||||.|
BPUM_1264___q 1 ATGCTTTCTCAAATCTATCCACAAACGAATCATCCATACTCATTTGAATT 50
BSNT_02307___ 51 GAATAAGGACATGCATATCTCAGCCGCTCATTTTATCCCTCGGGAAAGTG 100
||||||.||.||||||||.|||||.||.|||||.|||||..|.|||..||
BPUM_1264___q 51 GAATAAAGATATGCATATATCAGCTGCCCATTTCATCCCAAGAGAAGATG 100
BSNT_02307___ 101 CGGGAGCGTGCAGCAGGGTTCACGGACATACGTATACCGTAAATATAACC 150
|.||.||.||||||.|.||.||.||.||||||||.|||.|.|||||||||
BPUM_1264___q 101 CAGGTGCTTGCAGCCGTGTACATGGTCATACGTACACCATCAATATAACC 150
BSNT_02307___ 151 GTTGCCGGCGACGAACTTGACGATTCAGGCTTTCTTGTCAATTTCAGCGT 200
.||||.||.||.|||||.||.|||||.||.||.||||||||||||||...
BPUM_1264___q 151 ATTGCTGGAGATGAACTAGATGATTCGGGTTTCCTTGTCAATTTCAGTAC 200
BSNT_02307___ 201 ACTCAAAAAACTGGTGCACGGAAACTATGATCACACGCTATTAAATGATC 250
|||.||||||||..|.||.|||.|.|||||||||||.||..|.|||||||
BPUM_1264___q 201 ACTGAAAAAACTTATTCATGGACAGTATGATCACACACTGCTGAATGATC 250
BSNT_02307___ 251 ATGAAGATTTTTC-TCAGGACGA--CCGGTATTCGCTGCCGACAACTGAA 297
||||.||.||.|| ||| ||.| || .|||.||.||||.||.||.||.
BPUM_1264___q 251 ATGAGGAATTCTCATCA--ACCAATCC-ATATGCGATGCCTACTACAGAG 297
BSNT_02307___ 298 GTCGTGGCGAAAACGATTTATGACAACGT-ACAGGCTTATTTAGACACTT 346
||.|||||.||.||..|..|||||||.|| .|| |.|||||||...||||
BPUM_1264___q 298 GTTGTGGCAAAGACAGTCCATGACAAAGTCGCA-GATTATTTATCGACTT 346
BSNT_02307___ 347 TGGAGAATAAGCCGACCTGTGTACAGGTGTTTGTCCGTGAAACACCGACA 396
|.|..|||||.|||...|||||.|||||.|||||..|.||.|||||.|||
BPUM_1264___q 347 TAGCAAATAAACCGGTATGTGTTCAGGTCTTTGTGAGGGAGACACCAACA 396
BSNT_02307___ 397 AGCTACTGTGTCTACCGTCCGAAGAAGGGTGGTTTG-----AATGGCTAA 441
||||||||..|.|||||.||||| |.|.| ||| |||||||||
BPUM_1264___q 397 AGCTACTGCATTTACCGGCCGAA-ACGAG----TTGAGCACAATGGCTAA 441
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