Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02299 and BPUM_1260

See DNA alignment / Visit BSNT_02299 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:45
# Commandline: needle
#    -asequence pep-align/BSNT_02299___motA.1.24716.seq
#    -bsequence pep-align/BPUM_1260___motA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02299___motA-BPUM_1260___motA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02299___motA-BPUM_1260___motA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02299___motA
# 2: BPUM_1260___motA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 270
# Identity:     212/270 (78.5%)
# Similarity:   240/270 (88.9%)
# Gaps:           7/270 ( 2.6%)
# Score: 1067.0
# 
#
#=======================================

BSNT_02299___      1 MDKTSLIGIILAFVALSVGMVLKGVSFSALANPAAILIIIAGTISAVVIA     50
                     |||||||||||||:||||||||||||.:||.||||||||:.|||:|||||
BPUM_1260___m      1 MDKTSLIGIILAFIALSVGMVLKGVSLTALINPAAILIIVVGTIAAVVIA     50

BSNT_02299___     51 FPTKEIKKVPALFRVLFKENKQLTIEELIPMFSEWAQLARREGLLALEAS    100
                     ||:.||||.|.||..:||:||..||:|:||:||.|||:||||||||||||
BPUM_1260___m     51 FPSSEIKKTPKLFGKIFKDNKLPTIQEMIPLFSNWAQIARREGLLALEAS    100

BSNT_02299___    101 IEDVDDAFLKNGLSMAVDGQSAEFIRDIMTEEVEAMEDRHQAGAAIFTQA    150
                     ||:|||.||||||||||||||||||||::||||:||.:|||:||.|||||
BPUM_1260___m    101 IEEVDDDFLKNGLSMAVDGQSAEFIRDVLTEEVDAMAERHQSGALIFTQA    150

BSNT_02299___    151 GTYAPTLGVLGAVIGLIAALSHMDNTDELGHAISAAFVATLLGIFTGYVL    200
                     |||||||||||||:||||||::|.:.:.||||||||||||||||||||||
BPUM_1260___m    151 GTYAPTLGVLGAVVGLIAALANMGDIEALGHAISAAFVATLLGIFTGYVL    200

BSNT_02299___    201 WHPFANKLKRKSKQEVKLREVMIEGVLSVLEGQAPKVIEQKLLMYLPAKD    250
                     |||||||||||||:|||||.:||||:|||||||:|||||||||||||||:
BPUM_1260___m    201 WHPFANKLKRKSKEEVKLRLIMIEGILSVLEGQSPKVIEQKLLMYLPAKE    250

BSNT_02299___    251 RLKFA-EQGEAQNGEKKEEA    269
                     |.... |:||.|||      
BPUM_1260___m    251 RANLVIEEGEKQNG------    264


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