Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02296 and BPUM_1258

See DNA alignment / Visit BSNT_02296 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:45
# Commandline: needle
#    -asequence pep-align/BSNT_02296___ykvE.1.24716.seq
#    -bsequence pep-align/BPUM_1258___ykvE.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02296___ykvE-BPUM_1258___ykvE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02296___ykvE-BPUM_1258___ykvE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02296___ykvE
# 2: BPUM_1258___ykvE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 151
# Identity:     117/151 (77.5%)
# Similarity:   124/151 (82.1%)
# Gaps:           6/151 ( 4.0%)
# Score: 575.0
# 
#
#=======================================

BSNT_02296___      1 ----MTEKSLKLFIVLSRAYRSINDHMNKHIHKHGLNPTEFAVLELLYHK     46
                         ..||||||||||||||||||.||||||.||||||||||||||||||
BPUM_1258___y      1 MENHNVEKSLKLFIVLSRAYRSINHHMNKHIVKHGLNPTEFAVLELLYHK     50

BSNT_02296___     47 GDQPLQQIGDKILLASGSITYVVDKLEQKELLIRKASPTDRRVTFAQITE     96
                     |||||||||||||||||||||||||||:||||.|||...|||||||.|||
BPUM_1258___y     51 GDQPLQQIGDKILLASGSITYVVDKLEKKELLSRKACAEDRRVTFAHITE    100

BSNT_02296___     97 KGIGLLNDIFPDHAAEIDEMISVLSEEEVEMCTEMLKRVGLNAKQFHNK-    145
                     :|..||:|||||||.||.||||||||||.:.|.:|||.|||.||..::. 
BPUM_1258___y    101 QGRALLDDIFPDHAKEIHEMISVLSEEEKDACIDMLKHVGLRAKHLYDHK    150

BSNT_02296___    145 -    145
                      
BPUM_1258___y    151 E    151


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