Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02296 and BPUM_1258
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:45
# Commandline: needle
# -asequence dna-align/BSNT_02296___ykvE.1.24716.seq
# -bsequence dna-align/BPUM_1258___ykvE.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02296___ykvE-BPUM_1258___ykvE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02296___ykvE-BPUM_1258___ykvE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02296___ykvE
# 2: BPUM_1258___ykvE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 466
# Identity: 329/466 (70.6%)
# Similarity: 329/466 (70.6%)
# Gaps: 38/466 ( 8.2%)
# Score: 1119.5
#
#
#=======================================
BSNT_02296___ 1 -------ATGACA-----GAAAAATCACTGAAGTTATTTATCGTGCTGTC 38
||.|.| ||||||||..||||.||||||||.||..|.||
BPUM_1258___y 1 ATGGAAAATCATAATGTTGAAAAATCTTTGAAATTATTTATTGTATTATC 50
BSNT_02296___ 39 GCGCGCGTATCGGTCTATTAACGATCATATGAATAAGCATATTCATAAGC 88
.||.||.|||||.||.|||||..||||.|||||.||.||||||...||||
BPUM_1258___y 51 ACGTGCCTATCGCTCAATTAATCATCACATGAACAAACATATTGTGAAGC 100
BSNT_02296___ 89 ATGGGCTGAATCCGACTGAATTTGCTGTGCTAGAGCTTTTGTACCATAAA 138
|.||.||||||||||||||||||||.||..||||..|..||||.||||||
BPUM_1258___y 101 ACGGACTGAATCCGACTGAATTTGCGGTATTAGAATTACTGTATCATAAA 150
BSNT_02296___ 139 GGCGATCAGCCGCTACAGCAGATAGGAGATAAAATTCTCTTGGCTAGCGG 188
||.||||||||.||.|||||.||.||.|||||.|||.|..|.||.|||||
BPUM_1258___y 151 GGGGATCAGCCACTTCAGCAAATCGGTGATAAGATTTTACTCGCAAGCGG 200
BSNT_02296___ 189 GAGCATCACATACGTTGTAGATAAGCTGGAGCAAAAAGAACTTCTCATTC 238
.||||||||.||.||.||.|||||..|||||.|.||||||||.||||.||
BPUM_1258___y 201 CAGCATCACGTATGTGGTCGATAAATTGGAGAAGAAAGAACTCCTCAGTC 250
BSNT_02296___ 239 GGAAAGCGTCTCCTACAGACAGAC----GAGTGACATTTGCGCAAATTAC 284
|.||.||.| .|.|||| |||| |.||.||||||||.||.|||||
BPUM_1258___y 251 GTAAGGCCT---GTGCAGA-AGACCGCAGGGTCACATTTGCACATATTAC 296
BSNT_02296___ 285 TGAAAAAGGCATCGGTCTT---TTGAATGATATTTTCCCTGATCACGCTG 331
|||..|.|| .||..||| ||| |||||||.|||||.||||||||..
BPUM_1258___y 297 TGAGCAGGG--ACGAGCTTTGCTTG-ATGATATCTTCCCAGATCACGCGA 343
BSNT_02296___ 332 CTGAAATTGATGAAATGATCAGCGTATTAAGCGAAGAAGAGGTAGAGATG 381
..||||||.||||.||||||||.||..|.|||||||||||| |..||||
BPUM_1258___y 344 AAGAAATTCATGAGATGATCAGTGTCCTGAGCGAAGAAGAG--AAGGATG 391
BSNT_02296___ 382 --TGCACCGAAATG-TTAAAAAGAGTAGGATTAAACGCAAAACAGTT--- 425
||||..||.||| |||||.| .||.|||.|....||||||||.||
BPUM_1258___y 392 CCTGCATTGACATGCTTAAACA-TGTGGGACTTCGTGCAAAACATTTATA 440
BSNT_02296___ 426 ---TCATAATAAGTAA 438
||||||..|.|||
BPUM_1258___y 441 TGATCATAAAGAATAA 456
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