Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02292 and BPUM_1256

See DNA alignment / Visit BSNT_02292 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:45
# Commandline: needle
#    -asequence pep-align/BSNT_02292___spo0E.1.24716.seq
#    -bsequence pep-align/BPUM_1256___spo0E.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02292___spo0E-BPUM_1256___spo0E.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02292___spo0E-BPUM_1256___spo0E.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02292___spo0E
# 2: BPUM_1256___spo0E
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 89
# Identity:      33/89 (37.1%)
# Similarity:    50/89 (56.2%)
# Gaps:          13/89 (14.6%)
# Score: 149.0
# 
#
#=======================================

BSNT_02292___      1 MGGSSEQERLLVSIDEKRKLMIDAARKQGFTGHDTIRHSQELDCLINEYH     50
                     |.....:|:||:|||||||.|::||:.:|:||..||::|||||.|:|||.
BPUM_1256___s      1 MNSYVRKEQLLMSIDEKRKQMVEAAQAEGYTGETTIKYSQELDNLMNEYQ     50

BSNT_02292___     51 QLM-QENEHSQGIQGLVKKLGLWPRRDVMPAYDANK---     85
                     .|: .|.:.:......|.::.|         ...|:   
BPUM_1256___s     51 YLLFHEKQSAPSFHDFVSQMSL---------LSVNRASY     80


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