Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02288 and BPUM_1253

See DNA alignment / Visit BSNT_02288 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:45
# Commandline: needle
#    -asequence pep-align/BSNT_02288___mtnX.1.24716.seq
#    -bsequence pep-align/BPUM_1253___mtnX.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02288___mtnX-BPUM_1253___mtnX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02288___mtnX-BPUM_1253___mtnX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02288___mtnX
# 2: BPUM_1253___mtnX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 237
# Identity:     143/237 (60.3%)
# Similarity:   180/237 (75.9%)
# Gaps:           8/237 ( 3.4%)
# Score: 787.5
# 
#
#=======================================

BSNT_02288___      1 MTTRKPFIICDFDGTITMNDNIINIMKTFAPPEWVALKDGVLSKTLSIKE     50
                       .:||.:.||||||||.|||||.|||.|||.||..|||.||:|.::|:|
BPUM_1253___m      1 --MKKPIVCCDFDGTITKNDNIIRIMKHFAPSEWTKLKDDVLTKEITIQE     48

BSNT_02288___     51 GVGRMFGLLPSRLKEEITSFVLEDAKIREGFREFVAFINEHEIPFYVISG    100
                     |||:||.||.|..||.|.||:|||.:|||||::||..:.:.:|||||:||
BPUM_1253___m     49 GVGQMFQLLKSDQKEAIQSFILEDTEIREGFKQFVDHVKKADIPFYVLSG     98

BSNT_02288___    101 GMDFFVYPLLEGIVDKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCC    150
                     ||||||||:|||||:::.||||||||..::|.|:|||:|...|.|.||||
BPUM_1253___m     99 GMDFFVYPILEGIVEREDIYCNHASFHEEHIQIEWPHACDSQCQNGCGCC    148

BSNT_02288___    151 KPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLN    200
                     |||:|.||:..|.:|||||||||||||||.:||.||||||||||:|..|.
BPUM_1253___m    149 KPSIIRELTRENDFIIMIGDSVTDVEAAKHADLTFARDYLLNECKELGLV    198

BSNT_02288___    201 HLPYQDFYEIRKEIENVKEVQEWLQNK--NAGESSLK    235
                     |..|:.|.:::.:.:.:|||:|| |.|  :||.|   
BPUM_1253___m    199 HKEYETFIDLKAQFDQIKEVKEW-QTKRTSAGRS---    231


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