Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_02287 and BPUM_1252

See DNA alignment / Visit BSNT_02287 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:45
# Commandline: needle
#    -asequence pep-align/BSNT_02287___mtnW.1.24716.seq
#    -bsequence pep-align/BPUM_1252___mtnW.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02287___mtnW-BPUM_1252___mtnW.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02287___mtnW-BPUM_1252___mtnW.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02287___mtnW
# 2: BPUM_1252___mtnW
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 417
# Identity:     294/417 (70.5%)
# Similarity:   347/417 (83.2%)
# Gaps:           4/417 ( 1.0%)
# Score: 1532.0
# 
#
#=======================================

BSNT_02287___      1 -MDENERSSGMSELLATYLLT-EPGADTEKKAEQIATGLTVGSWTDLPLV     48
                      .|..||...:|||||||:|| .......:||||||.|||||||||||.:
BPUM_1252___m      1 MYDAIERGFLVSELLATYVLTHREDEQVNRKAEQIALGLTVGSWTDLPQL     50

BSNT_02287___     49 KQEQMQKHKGRVIKVEEREGTAASE-KQAVITIAYPEINFSQDIPALLTT     97
                     |:||:|||||||.||.|:...|.:. .|:.:||||||.|||.||||:|:|
BPUM_1252___m     51 KKEQLQKHKGRVEKVTEKFAPAENGLYQSEVTIAYPEANFSADIPAVLST    100

BSNT_02287___     98 VFGKLSLDGKIKLIDLHFSEVFKRALPGPKFGVYGIRKLLGEFERPLLMS    147
                     :|||||||||:||:|:.||:.||::||||.||:.||||..|.|:||||||
BPUM_1252___m    101 IFGKLSLDGKVKLVDIQFSDRFKKSLPGPVFGIDGIRKKTGVFDRPLLMS    150

BSNT_02287___    148 IFKGVIGRDLSDIKEQLRQQALGGVDLIKDDEIFFETGLAPFETRIAEGK    197
                     |||||||||::|:|||||.|||||||.||||||.||:.|||||.||.|||
BPUM_1252___m    151 IFKGVIGRDMTDLKEQLRLQALGGVDFIKDDEILFESPLAPFEDRIKEGK    200

BSNT_02287___    198 QILKETYEQTGHKTLYAVNLTGRTADLKDKARRAAELGADALLFNVFAYG    247
                     :|||||||:|||:|||||:|||||.:|:|:||:|||||||||||||||||
BPUM_1252___m    201 KILKETYEETGHRTLYAVHLTGRTFELRDRARKAAELGADALLFNVFAYG    250

BSNT_02287___    248 LDVMQGLAEDPEIPVPIMAHPAVSGAFTSSPFYGFSHALLLGKLNRYCGA    297
                     |||||.|||||:|.:|||||||||||.||||.|||||:|||||||||.||
BPUM_1252___m    251 LDVMQSLAEDPDIRLPIMAHPAVSGALTSSPEYGFSHSLLLGKLNRYAGA    300

BSNT_02287___    298 DFSLFPSPYGSVALPRADALAIHEECVREDAFNQTFAVPSAGIHPGMVPL    347
                     |.|||||||||||||:.||..|:|.||:||:..:||.||||||||||||:
BPUM_1252___m    301 DLSLFPSPYGSVALPKKDAFGIYEACVKEDSVQKTFPVPSAGIHPGMVPV    350

BSNT_02287___    348 LMRDFGIDHIINAGGGVHGHPNGAQGGGRAFRAIIDAVLEAQPIDEKAEQ    397
                     ||:|||:||:||||||:||||.||.|||:|||:|||||:..:.|.||...
BPUM_1252___m    351 LMKDFGLDHVINAGGGIHGHPRGAIGGGKAFRSIIDAVIHGESIQEKTAS    400

BSNT_02287___    398 CKDLKLALDKWGKVEAV    414
                     |:|||.||:.||:|.. 
BPUM_1252___m    401 CQDLKAALELWGRVVE-    416


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.