Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02276 and BPUM_1246
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:44
# Commandline: needle
# -asequence pep-align/BSNT_02276___ykrP.1.24716.seq
# -bsequence pep-align/BPUM_1246___ykrP.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02276___ykrP-BPUM_1246___ykrP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02276___ykrP-BPUM_1246___ykrP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02276___ykrP
# 2: BPUM_1246___ykrP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 340
# Identity: 231/340 (67.9%)
# Similarity: 286/340 (84.1%)
# Gaps: 1/340 ( 0.3%)
# Score: 1260.0
#
#
#=======================================
BSNT_02276___ 1 MSKSRDSYFDNAKFLLIFLVVFGHILRSFINDNHFMLYLYKFIYTFHMPA 50
|:.|||||||||||||||||||||:|||||:||.:|||||||||||||||
BPUM_1246___y 1 MASSRDSYFDNAKFLLIFLVVFGHLLRSFIHDNDWMLYLYKFIYTFHMPA 50
BSNT_02276___ 51 FILVSGYFAKGFKRAGYVKKLAVKLIIPYLIFQIIYSVFYYIMQDESMAN 100
||||||:|||||::.|::||:||||||||.|||:||||:||::||:|:||
BPUM_1246___y 51 FILVSGFFAKGFRKPGFMKKVAVKLIIPYFIFQVIYSVYYYLLQDQSIAN 100
BSNT_02276___ 101 VNPIDPQWSLWFLVSLFFWNLLLYPFSKVSKQWALFVSCGIAVLIGYLDF 150
:||||||||||||:|||||||||.||||:..|||:.||..||:|:||:|.
BPUM_1246___y 101 LNPIDPQWSLWFLISLFFWNLLLIPFSKLPFQWAMIVSLSIALLVGYVDS 150
BSNT_02276___ 151 VSSTLSLSRTFVFLPMFLVGFYLNKHHFDLLRSKRGKQIALGVLAAVFVI 200
:|:|||||||||||||||.||||.|.||:.:|:.:||..||.||.|||:.
BPUM_1246___y 151 ISNTLSLSRTFVFLPMFLAGFYLKKQHFEFIRTSKGKLAALLVLMAVFLF 200
BSNT_02276___ 201 CWGIDFDYSFLFGSKPYSSFGDVTLVSGLSRIGWYVLAFGATFSFLALVP 250
|:..:|||||||||:.|:|.||..:::.:.|:.||:|||||||||.||||
BPUM_1246___y 201 CYLYEFDYSFLFGSQSYASLGDEGVIAAMKRMAWYLLAFGATFSFFALVP 250
BSNT_02276___ 251 QKRYFFTKWGTRTFYVYLLHGFIIKTLRQVGLEDWLTDYQSLVILLLLTA 300
.:|:|||||||||.||||||||:||.||....:||..:..|:::|||||.
BPUM_1246___y 251 TRRFFFTKWGTRTLYVYLLHGFVIKLLRTTWFDDWALNAASVLMLLLLTI 300
BSNT_02276___ 301 ALTSVLSSNFVKTVAQPFIELRMTSLLQFVRGTGKNAYLK 340
.||..|||.||||||||.|||:||:|::.:.|. :.:|.|
BPUM_1246___y 301 LLTFTLSSTFVKTVAQPVIELKMTNLMRTITGR-QGSYSK 339
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