Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00959 and BPUM_1243
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:38
# Commandline: needle
# -asequence pep-align/BSNT_00959.1.24716.seq
# -bsequence pep-align/BPUM_1243.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00959-BPUM_1243.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00959-BPUM_1243.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00959
# 2: BPUM_1243
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 199
# Identity: 35/199 (17.6%)
# Similarity: 60/199 (30.2%)
# Gaps: 115/199 (57.8%)
# Score: 177.0
#
#
#=======================================
BSNT_00959 0 -------------------------------------------------- 0
BPUM_1243 1 MLDVLWKAIVMLLVGTLLLRIAGPKSISQLTVQQTVIMISIGSIIIQPFI 50
BSNT_00959 1 ---------------------------------MLTGEAKVVIENGQLHI 17
:::|::.|::::|::..
BPUM_1243 51 EHNLLETIYAAATFIVALVIMEKLSIQSDFFEKLVSGKSVVILQDGEMLD 100
BSNT_00959 18 ENLKKMRLTVDQLEMQLRLHGVTGIQDVKIATLEANGQLGIELTDDAKPL 67
..|||.|||.|||:|:|:..|:|.|..:|.||||||||:|.||..:.||:
BPUM_1243 101 HKLKKTRLTRDQLKMRLKQQGITEISSLKKATLEANGQIGYELKPEEKPV 150
BSNT_00959 68 TVRDLKKLIHP-----DFINKDGQAQSGNQNIFDEVGKKNKKNVPKKLH 111
||:.:.:.:.. :.:.||
BPUM_1243 151 TVKQMTEFLDQLREELNMLKKD--------------------------- 172
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