Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02270 and BPUM_1242
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:43
# Commandline: needle
# -asequence pep-align/BSNT_02270___ykrM.1.24716.seq
# -bsequence pep-align/BPUM_1242___ykrM.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02270___ykrM-BPUM_1242___ykrM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02270___ykrM-BPUM_1242___ykrM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02270___ykrM
# 2: BPUM_1242___ykrM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 450
# Identity: 345/450 (76.7%)
# Similarity: 396/450 (88.0%)
# Gaps: 3/450 ( 0.7%)
# Score: 1759.0
#
#
#=======================================
BSNT_02270___ 1 MRLKFGKLIQALSPAQLIALYYFLAVTVAVILLSLPAAHKPGADWTFIDA 50
.....|||..||..|||||||||||||::||||||.||:.|..||||||
BPUM_1242___y 1 -MNPIKKLIDRLSAFQLIALYYFLAVTVSLILLSLPVAHQDGVKWTFIDA 49
BSNT_02270___ 51 LFTAVSSVSVTGLTVVDTADTFSTIGIFILAFVLQFGGIGIMTLGTFIWL 100
||||||:|||||||||||:.|||..|::|||||||.|||||||||||:|:
BPUM_1242___y 50 LFTAVSAVSVTGLTVVDTSQTFSVAGMWILAFVLQIGGIGIMTLGTFVWI 99
BSNT_02270___ 101 IMGKRIGLKERKLIMVDQNQSQFSGIVNLMKQVLFLILWIEFFGGLILGT 150
:|.||||:|||||||.|||||..||||.||||||:|||.|||.|||||..
BPUM_1242___y 100 VMRKRIGIKERKLIMADQNQSNLSGIVKLMKQVLYLILLIEFVGGLILSM 149
BSNT_02270___ 151 YFLTYYDSYQEAYLHGFFASISATTNGGFDITGNSMIPFRHDYFVQFITM 200
|||.||| .|.|:|||||:||||||||||||||||:||::.|||||||||
BPUM_1242___y 150 YFLKYYD-VQTAFLHGFFSSISATTNGGFDITGNSLIPYKDDYFVQFITM 198
BSNT_02270___ 201 LLIIFGAIGFPVLVEVKDFLFSKHRRY-PFTLFTKITTITFGSLVLFGAI 249
||||||||||||||||||:||::.|:: .|:||||||||||||||:.|||
BPUM_1242___y 199 LLIIFGAIGFPVLVEVKDYLFNQDRKHASFSLFTKITTITFGSLVIVGAI 248
BSNT_02270___ 250 GIFALEANHAFAGKSWHDILFLSLFQSTATRSGGLATIDISQLSDSTLFF 299
||:||||...|.|||||::||.|||||||||||||:|:||:||::.||.|
BPUM_1242___y 249 GIYALEARFTFLGKSWHEVLFYSLFQSTATRSGGLSTLDITQLTEPTLLF 298
BSNT_02270___ 300 ICALMFIGASPSSVGGGIRTTTFALNLLALFHFARGNKAVKVFKRELHPA 349
:|.|||||||||||||||||||||||||||||||||||::|:||||||.|
BPUM_1242___y 299 LCLLMFIGASPSSVGGGIRTTTFALNLLALFHFARGNKSIKIFKRELHQA 348
BSNT_02270___ 350 DLMKSLVVTMMAILLVFGATLILTITEKHSLLELLFEVCSAFGTTGLSLG 399
|:.|||:|||||.:||||||.:||::|.::||:.||||||||||||||||
BPUM_1242___y 349 DINKSLMVTMMAFILVFGATFLLTLSEHNTLLQNLFEVCSAFGTTGLSLG 398
BSNT_02270___ 400 ITADLSSVGKCVIMIVMFIGRIGILTFLYLIGRKEIEANYHYPKERVIIG 449
||::||..|||:||:|||||||||.:|||||||:|.||||||||||||||
BPUM_1242___y 399 ITSELSVFGKCIIMMVMFIGRIGIPSFLYLIGRRESEANYHYPKERVIIG 448
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