Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02267 and BPUM_1239

See DNA alignment / Visit BSNT_02267 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:43
# Commandline: needle
#    -asequence pep-align/BSNT_02267___sspD.1.24716.seq
#    -bsequence pep-align/BPUM_1239___sspD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02267___sspD-BPUM_1239___sspD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02267___sspD-BPUM_1239___sspD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02267___sspD
# 2: BPUM_1239___sspD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 64
# Identity:      52/64 (81.2%)
# Similarity:    59/64 (92.2%)
# Gaps:           0/64 ( 0.0%)
# Score: 263.0
# 
#
#=======================================

BSNT_02267___      1 MASRNKLVVPGVEQALDQFKLEVAQEFGVNLGSDTVARANGSVGGEMTKR     50
                     ||:||:|:||||||||||||.|:||||||.||||||||||||||||:|||
BPUM_1239___s      1 MANRNQLLVPGVEQALDQFKYEIAQEFGVTLGSDTVARANGSVGGEITKR     50

BSNT_02267___     51 LVQQAQSQLNGTTK     64
                     ||||||||:...:|
BPUM_1239___s     51 LVQQAQSQMGNQSK     64


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