Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02265 and BPUM_1238
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:43
# Commandline: needle
# -asequence pep-align/BSNT_02265___ykrI.1.24716.seq
# -bsequence pep-align/BPUM_1238___rsgI.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02265___ykrI-BPUM_1238___rsgI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02265___ykrI-BPUM_1238___rsgI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02265___ykrI
# 2: BPUM_1238___rsgI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 415
# Identity: 170/415 (41.0%)
# Similarity: 256/415 (61.7%)
# Gaps: 55/415 (13.3%)
# Score: 804.5
#
#
#=======================================
BSNT_02265___ 1 MRRGIIVEKNKKFVTLLTPDGQFLKAKNDRHSYEIGEEIMLPSETRMGR- 49
||||||||||||:|||||||||||:.|.::..||||:|:..|:|:|:.|
BPUM_1238___r 1 MRRGIIVEKNKKYVTLLTPDGQFLRTKYEQQDYEIGQEVTFPNESRLERK 50
BSNT_02265___ 50 RASFFDFFKLRPFKMGIFTMTAIMLFIFIVLPVFSNNKAYAYMTIDINPS 99
:|.|||..:|||...||.::.||::.||.::|.||:.|||||||||||||
BPUM_1238___r 51 KAGFFDLLRLRPLNAGILSIAAIIVVIFTMMPSFSSQKAYAYMTIDINPS 100
BSNT_02265___ 100 VEMALNSDYEVIELTPLNDEGQKVVNDIDDWEKTDFKKVIDDIITDCSEH 149
.|:.|:.:|:||.:||||.:.::|:..:.|.||:|..||:.:||.||.:.
BPUM_1238___r 101 FELKLDHNYQVIGVTPLNKDAKQVLASMKDLEKSDMTKVVQEIIDDCDKK 150
BSNT_02265___ 150 GYVKKSKEILISTVYENTEDNTYKKAVKKQLNDVTEKY-KTTYRMESLES 198
|||..||.|.|||||||.:|:|||..||.::|.::.:| |..|::|::||
BPUM_1238___r 151 GYVNHSKSIYISTVYENKQDHTYKTNVKSKINTISGEYQKRDYKLETVES 200
BSNT_02265___ 199 DMQTREKAKKEGVSTGSYIKSNEKND--NKDI-KDDSSKPSG---EEDQK 242
|::|||||:|.|:|||:||::.|..| .:|| ||:.:..|. ||:.|
BPUM_1238___r 201 DLETREKAQKAGISTGTYIRNQEMQDKEQEDIQKDEDAAESDAVKEEEPK 250
BSNT_02265___ 243 SDENEDENTDQTDTQDSKQGDNEQLN------DADSGDQKEEKADDQ--- 283
.| :::..||...:|.|.||:|::. :|:..:||::|.::|
BPUM_1238___r 251 KD--DEDQADQDKQEDIKSGDSEEMKPDQEAPEAEDKEQKDQKREEQGSI 298
BSNT_02265___ 284 -------IDDSDKDKKIK-ESDENTNTEKDGDHEQTPIQDPQDKGNENNG 325
.||..||.:|| |.|.:.:.|:..:|. .:|.||.|. ||
BPUM_1238___r 299 EKPHQTKPDDKSKDNQIKEEKDRSIDKEQKKNHS----TEPDDKRNP-NG 343
BSNT_02265___ 326 ADKGQSQYHRDWNNGEQGKNRSSSRRDNASDRRNPNGYSSDNNSAQNEDS 375
..:|.::.| .|....:::..:|||: .::...|.:.:
BPUM_1238___r 344 TSRGGAEKH--------AKKNDRNQKQPSSDRK------KEHMKKQGKGA 379
BSNT_02265___ 376 PSAPGE--------- 381
||...|
BPUM_1238___r 380 PSPYRENWYEHTYEQ 394
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