Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02261 and BPUM_1236
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:43
# Commandline: needle
# -asequence pep-align/BSNT_02261___ykoY.1.24716.seq
# -bsequence pep-align/BPUM_1236___ykoY.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02261___ykoY-BPUM_1236___ykoY.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02261___ykoY-BPUM_1236___ykoY.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02261___ykoY
# 2: BPUM_1236___ykoY
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 333
# Identity: 204/333 (61.3%)
# Similarity: 227/333 (68.2%)
# Gaps: 79/333 (23.7%)
# Score: 1015.5
#
#
#=======================================
BSNT_02261___ 1 MYSGNKVVISWIVSIGFVGMPEFMSSKTFALCRQRSFLHGPAGIRSDEEK 50
BPUM_1236___y 0 -------------------------------------------------- 0
BSNT_02261___ 51 ENNFFGRVSFMDAALLLEYGWVLLVLIGLEGILAADNALVMAVMVKHLPE 100
||||::||||||||||||||||||||||||||||||||||
BPUM_1236___y 1 ----------MDAAIILEYGWVLLVLIGLEGILAADNALVMAVMVKHLPE 40
BSNT_02261___ 101 EKRKKALFYGLAGAFVLRFGSLFAISFLVNVWQVQAIGAIYLLYISASHL 150
::||||||||||||||:||||||.|||||:||||||||||||||||..|:
BPUM_1236___y 41 KQRKKALFYGLAGAFVMRFGSLFLISFLVDVWQVQAIGAIYLLYISIHHI 90
BSNT_02261___ 151 LKRYVFKKEDTHKETKQSGFWPTVLKVELADIAFAVDSILAAVALAVTLP 200
||.:||||:::....||||||.||:|||||||||||||||||||||||||
BPUM_1236___y 91 LKSHVFKKKESDTNMKQSGFWATVVKVELADIAFAVDSILAAVALAVTLP 140
BSNT_02261___ 201 GTSLPKIGGLDGGQFLVILAGGIIGLVIMRFAASMFVKLLKERPSLETAA 250
.||||:|||||||||:|||.||||||:||||||::||||||.||||||||
BPUM_1236___y 141 KTSLPQIGGLDGGQFIVILLGGIIGLIIMRFAATVFVKLLKTRPSLETAA 190
BSNT_02261___ 251 FVIVGWVGVKLALYTLAHRDIAVVSEHFIHSGTWKLIFWGVLAAIAVCGW 300
|||||||||||.||||:|..|.:||.|||||..||:|||.||.|||..||
BPUM_1236___y 191 FVIVGWVGVKLTLYTLSHPAIGIVSSHFIHSTLWKVIFWTVLLAIAAFGW 240
BSNT_02261___ 301 FMS-----GG----KKQPEGAQNEQRNSTRERA 324
|:| || :||.|..:.
BPUM_1236___y 241 FLSSPSRKGGQQIKEKQEERLEE---------- 263
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