Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02258 and BPUM_1235
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:43
# Commandline: needle
# -asequence pep-align/BSNT_02258___ykoX.1.24716.seq
# -bsequence pep-align/BPUM_1235___ykoX.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02258___ykoX-BPUM_1235___ykoX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02258___ykoX-BPUM_1235___ykoX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02258___ykoX
# 2: BPUM_1235___ykoX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 212
# Identity: 148/212 (69.8%)
# Similarity: 177/212 (83.5%)
# Gaps: 9/212 ( 4.2%)
# Score: 828.0
#
#
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BSNT_02258___ 1 -MAIEELVMSWIEAFKSLSYFGIFLALSIEFIPAEVVLPLAGYWVSKGDM 49
:.||:.::|..:|||:||||||||||.|||:||||||||||||||||||
BPUM_1235___y 1 MINIEDFIISLADAFKNLSYFGIFLALCIEFVPAEVVLPLAGYWVSKGDM 50
BSNT_02258___ 50 TLAGVVLAGSLGGVAGPLTLYWIGRYGGRPFLERFGKYLFIKPEALDKSD 99
...|||.|||:|||||||||||:|||||||||.::|||.|:|||:|||||
BPUM_1235___y 51 AFIGVVAAGSIGGVAGPLTLYWLGRYGGRPFLNKYGKYFFVKPESLDKSD 100
BSNT_02258___ 100 KFFKKHGGFVAFSGRFLPGIRTLISIPCGIAKMNVWVFSLYTFIAMLPIT 149
.||:||||||||||||:||:||||||||||||||||||.||||:|:.|||
BPUM_1235___y 101 AFFEKHGGFVAFSGRFIPGVRTLISIPCGIAKMNVWVFCLYTFLAITPIT 150
BSNT_02258___ 150 FVYVYLGVKLGENWKEVGSILDQYMLPIGIAILALFLLYLLMKKRKKRTH 199
|||||||..|||||||||::||.|:|||||.|:.||.:|:.:|:||::..
BPUM_1235___y 151 FVYVYLGFVLGENWKEVGAMLDPYLLPIGIGIVLLFAMYIWLKRRKRKAE 200
BSNT_02258___ 200 SEQLSVFLKNKR 211
:...
BPUM_1235___y 201 TPTA-------- 204
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