Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02258 and BPUM_1235

See DNA alignment / Visit BSNT_02258 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:43
# Commandline: needle
#    -asequence pep-align/BSNT_02258___ykoX.1.24716.seq
#    -bsequence pep-align/BPUM_1235___ykoX.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02258___ykoX-BPUM_1235___ykoX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02258___ykoX-BPUM_1235___ykoX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02258___ykoX
# 2: BPUM_1235___ykoX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 212
# Identity:     148/212 (69.8%)
# Similarity:   177/212 (83.5%)
# Gaps:           9/212 ( 4.2%)
# Score: 828.0
# 
#
#=======================================

BSNT_02258___      1 -MAIEELVMSWIEAFKSLSYFGIFLALSIEFIPAEVVLPLAGYWVSKGDM     49
                      :.||:.::|..:|||:||||||||||.|||:||||||||||||||||||
BPUM_1235___y      1 MINIEDFIISLADAFKNLSYFGIFLALCIEFVPAEVVLPLAGYWVSKGDM     50

BSNT_02258___     50 TLAGVVLAGSLGGVAGPLTLYWIGRYGGRPFLERFGKYLFIKPEALDKSD     99
                     ...|||.|||:|||||||||||:|||||||||.::|||.|:|||:|||||
BPUM_1235___y     51 AFIGVVAAGSIGGVAGPLTLYWLGRYGGRPFLNKYGKYFFVKPESLDKSD    100

BSNT_02258___    100 KFFKKHGGFVAFSGRFLPGIRTLISIPCGIAKMNVWVFSLYTFIAMLPIT    149
                     .||:||||||||||||:||:||||||||||||||||||.||||:|:.|||
BPUM_1235___y    101 AFFEKHGGFVAFSGRFIPGVRTLISIPCGIAKMNVWVFCLYTFLAITPIT    150

BSNT_02258___    150 FVYVYLGVKLGENWKEVGSILDQYMLPIGIAILALFLLYLLMKKRKKRTH    199
                     |||||||..|||||||||::||.|:|||||.|:.||.:|:.:|:||::..
BPUM_1235___y    151 FVYVYLGFVLGENWKEVGAMLDPYLLPIGIGIVLLFAMYIWLKRRKRKAE    200

BSNT_02258___    200 SEQLSVFLKNKR    211
                     :...        
BPUM_1235___y    201 TPTA--------    204


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