Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02242 and BPUM_1233

See DNA alignment / Visit BSNT_02242 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:42
# Commandline: needle
#    -asequence pep-align/BSNT_02242___ykoM.1.24716.seq
#    -bsequence pep-align/BPUM_1233___ykoM.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02242___ykoM-BPUM_1233___ykoM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02242___ykoM-BPUM_1233___ykoM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02242___ykoM
# 2: BPUM_1233___ykoM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 154
# Identity:     140/154 (90.9%)
# Similarity:   146/154 (94.8%)
# Gaps:           1/154 ( 0.6%)
# Score: 712.0
# 
#
#=======================================

BSNT_02242___      1 MMRLSFNEEEVERAMNLYRVFARAFKSVSEHSIRDSKEHGFNPTEFAVLE     50
                      ||||||||||||:|.||:|||||||||||||||||||||||||||||||
BPUM_1233___y      1 -MRLSFNEEEVERSMTLYKVFARAFKSVSEHSIRDSKEHGFNPTEFAVLE     49

BSNT_02242___     51 LLYTRGPQKLQQIGSRLLLVSGNVTYVIDKLERNGFLVREQDPKDKRSVY    100
                     ||||||.|||||||||||||||||||||||||||||:.||||||||||||
BPUM_1233___y     50 LLYTRGAQKLQQIGSRLLLVSGNVTYVIDKLERNGFIEREQDPKDKRSVY     99

BSNT_02242___    101 AHLTDKGNEYLDKIYPIHALRIARAFSGLSPDEQDQLIVLLKKAGIHSQH    150
                     |||||||..|||||||||:|||||||||||.:||:|||.|||||||||||
BPUM_1233___y    100 AHLTDKGRSYLDKIYPIHSLRIARAFSGLSREEQEQLISLLKKAGIHSQH    149

BSNT_02242___    151 LLFR    154
                     ||||
BPUM_1233___y    150 LLFR    153


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