Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02236 and BPUM_1223

See DNA alignment / Visit BSNT_02236 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:42
# Commandline: needle
#    -asequence pep-align/BSNT_02236___ykzD.1.24716.seq
#    -bsequence pep-align/BPUM_1223___ykzD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02236___ykzD-BPUM_1223___ykzD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02236___ykzD-BPUM_1223___ykzD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02236___ykzD
# 2: BPUM_1223___ykzD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 47
# Identity:      26/47 (55.3%)
# Similarity:    35/47 (74.5%)
# Gaps:           3/47 ( 6.4%)
# Score: 136.0
# 
#
#=======================================

BSNT_02236___      1 -MEKKEEQYINQAEYVPHPTKEGEYALFLHETYHLLSEDDETQTTE-     45
                      .:|:|||.::.|||||||..|| ||||||:::||||::|..|..| 
BPUM_1223___y      1 MKKKEEEQTMDHAEYVPHPDGEG-YALFLHDSFHLLSQEDMNQPEEE     46


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