Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02236 and BPUM_1223
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:42
# Commandline: needle
# -asequence dna-align/BSNT_02236___ykzD.1.24716.seq
# -bsequence dna-align/BPUM_1223___ykzD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02236___ykzD-BPUM_1223___ykzD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02236___ykzD-BPUM_1223___ykzD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02236___ykzD
# 2: BPUM_1223___ykzD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 146
# Identity: 99/146 (67.8%)
# Similarity: 99/146 (67.8%)
# Gaps: 13/146 ( 8.9%)
# Score: 276.5
#
#
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BSNT_02236___ 1 ATG--GAAAAGA-AAGAGGAGCAATAC-ATCAATCAGGCTGAATATGTCC 46
||| |||||.| ||||.|||||| || ||..|.||.||.||||||||.|
BPUM_1223___y 1 ATGAAGAAAAAAGAAGAAGAGCAA-ACAATGGACCATGCGGAATATGTTC 49
BSNT_02236___ 47 CTCATCC-GACGAAGGAAGGAGAGTATGCCTTATTTCTTCATGAAACGTA 95
|.||.|| ||||.| |||||| |||||.||.|||.|.|||||..|.|.
BPUM_1223___y 50 CGCACCCTGACGGA-GAAGGA---TATGCTTTGTTTTTGCATGATTCCTT 95
BSNT_02236___ 96 TCATTTGCTTTCTGAAGATGACGAGACACAAACAACA---GAATAA 138
||||.|.||.||..||||.||...||..||..||..| ||||||
BPUM_1223___y 96 TCATCTCCTCTCCCAAGAGGATATGAATCAGCCAGAAGAGGAATAA 141
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