Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02218 and BPUM_1215

See DNA alignment / Visit BSNT_02218 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:40
# Commandline: needle
#    -asequence pep-align/BSNT_02218___metE.1.24716.seq
#    -bsequence pep-align/BPUM_1215___metE.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02218___metE-BPUM_1215___metE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02218___metE-BPUM_1215___metE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02218___metE
# 2: BPUM_1215___metE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 762
# Identity:     582/762 (76.4%)
# Similarity:   658/762 (86.4%)
# Gaps:           0/762 ( 0.0%)
# Score: 3113.0
# 
#
#=======================================

BSNT_02218___      1 MTTIKTSNLGFPRIGLNREWKKALEAYWKGSTDKDTFLKQIDELFLSAVK     50
                     ||.:|||||||||||||||||||||:||||.||::|.|..:||.||:|:|
BPUM_1215___m      1 MTIVKTSNLGFPRIGLNREWKKALESYWKGQTDRETLLSTLDEQFLTAIK     50

BSNT_02218___     51 TQIDQQIDVVPVSDFTQYDHVLDTAVSFNWIPKRFRHLTDATDTYFAIAR    100
                     |||||||||||..|||.|||||||||.|||||:|||.|.|..||||||||
BPUM_1215___m     51 TQIDQQIDVVPSGDFTFYDHVLDTAVMFNWIPERFRSLKDPLDTYFAIAR    100

BSNT_02218___    101 GIKDAVSSEMTKWFNTNYHYIVPEYDESIEFRLTRNKQLEDYRRIKQEYG    150
                     |.|||||||||||||||||||||||::|.||:||.||.||.|.::|:.:|
BPUM_1215___m    101 GTKDAVSSEMTKWFNTNYHYIVPEYEKSTEFKLTHNKPLEAYEKVKKAFG    150

BSNT_02218___    151 VETKPVIVGPYTFVTLAKGYEPSEAKAIQKRLVPLYVQLLKELEEEGVKW    200
                     ||||||::|.||||:|:|||||:|.|.||:||:|||.||||||||.||||
BPUM_1215___m    151 VETKPVVLGLYTFVSLSKGYEPNEVKEIQQRLIPLYTQLLKELEEAGVKW    200

BSNT_02218___    201 VQIDEPALVTASSEDVRGAKELFESITSELSSLNVLLQTYFDSVDAYEEL    250
                     ||||||||||||.|||:..||::::||..:.:||:|||||||||||||||
BPUM_1215___m    201 VQIDEPALVTASYEDVKAVKEIYQTITEAVPALNILLQTYFDSVDAYEEL    250

BSNT_02218___    251 ISYPVQGIGLDFVHDKGRNLEQLKTHGFPTDKVLAVGVIDGRNIWKADLE    300
                     ::|||:.||||||||:||||:|:|.||||.||:||.|||||||||::||.
BPUM_1215___m    251 VTYPVEAIGLDFVHDQGRNLDQVKKHGFPKDKILAAGVIDGRNIWRSDLG    300

BSNT_02218___    301 ERLDAVLDILSIAKVDELWIQPSSSLLHVPVAKHPDEHLEKDLLNGLSYA    350
                     |||..|.::::.|:..|:|:|||||||||||||||.|.||:.||||||||
BPUM_1215___m    301 ERLTFVSEVIAGAQPKEVWLQPSSSLLHVPVAKHPSEQLEEKLLNGLSYA    350

BSNT_02218___    351 KEKLAELTALKEGLVSGKAAISEEIQQAKADIQALKQFATGANSEQKKEL    400
                     .|||||||.|||||..|.|||...|.:|:..:..||:||.|.|::...|.
BPUM_1215___m    351 TEKLAELTTLKEGLTKGAAAIEAAINEAEQALLTLKEFAKGTNADFTAER    400

BSNT_02218___    401 EQLTDKDFKRPIPFEERLALQNESLGLPLLPTTTIGSFPQSAEVRSARQK    450
                     ..|:.||||||:.|||||.:|||||.||||||||||||||||||||||||
BPUM_1215___m    401 NNLSSKDFKRPVAFEERLRIQNESLELPLLPTTTIGSFPQSAEVRSARQK    450

BSNT_02218___    451 WRKAEWSDEQYQNFINAETKRWIDIQEELELDVLVHGEFERTDMVEYFGE    500
                     |||.||::.:|..||..|||||||||||:.||||||||||||||||||||
BPUM_1215___m    451 WRKNEWTNAEYDEFIKKETKRWIDIQEEIGLDVLVHGEFERTDMVEYFGE    500

BSNT_02218___    501 KLAGFAFTKYAWVQSYGSRCVRPPVIYGDVEFIEPMTVKDTVYAQSLTSK    550
                     |||||||||:|||||||||||:||:|||||||..|||||:||||||||.|
BPUM_1215___m    501 KLAGFAFTKFAWVQSYGSRCVKPPIIYGDVEFTAPMTVKETVYAQSLTEK    550

BSNT_02218___    551 HVKGMLTGPVTILNWSFPRNDISRKEIAFQIGLALRKEVKALEDAGIQII    600
                     .||||||||||||||||||.|||||:|||||..||||||:|||:||||:|
BPUM_1215___m    551 KVKGMLTGPVTILNWSFPRTDISRKDIAFQIAFALRKEVEALEEAGIQVI    600

BSNT_02218___    601 QVDEPALREGLPLKTRDWDEYLTWAAEAFRLTTSSVKNETQIHTHMCYSN    650
                     ||||||||||||||..||.:||.||||:|||:||||:|||||||||||||
BPUM_1215___m    601 QVDEPALREGLPLKESDWADYLNWAAESFRLSTSSVQNETQIHTHMCYSN    650

BSNT_02218___    651 FEDIVDTINDLDADVITIEHSRSHGGFLDYLKNHPYLKGLGLGVYDIHSP    700
                     ||||||||.||||||||||||||||||||||:.|||||||||||||||||
BPUM_1215___m    651 FEDIVDTIEDLDADVITIEHSRSHGGFLDYLEKHPYLKGLGLGVYDIHSP    700

BSNT_02218___    701 RVPSTEEMYNIIVDALAVCPTDRFWVNPDCGLKTRQQEETVAALKNMVEA    750
                     ||||.|||..||.|||.|||||||||||||||||||:.||:|||||||.|
BPUM_1215___m    701 RVPSVEEMSQIIDDALNVCPTDRFWVNPDCGLKTRQEPETIAALKNMVTA    750

BSNT_02218___    751 AKQARAKQTQLV    762
                     |:.||.|..|..
BPUM_1215___m    751 AEVARKKLAQHA    762


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_02218 and BPUM_1215

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
