Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02204 and BPUM_1205

See DNA alignment / Visit BSNT_02204 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:40
# Commandline: needle
#    -asequence pep-align/BSNT_02204___purU.1.24716.seq
#    -bsequence pep-align/BPUM_1205___purU.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02204___purU-BPUM_1205___purU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02204___purU-BPUM_1205___purU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02204___purU
# 2: BPUM_1205___purU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 300
# Identity:     235/300 (78.3%)
# Similarity:   264/300 (88.0%)
# Gaps:           0/300 ( 0.0%)
# Score: 1245.0
# 
#
#=======================================

BSNT_02204___      1 MKSYMTQRLDEYRDGNEDKGRLLVSCPDQPGIVSAVSAFLFEHDANIIES     50
                     |::.:|::|:.:|..:|.|||||||||||||||||||:|||||.||||||
BPUM_1205___p      1 MRTLITEKLELHRQKHEQKGRLLVSCPDQPGIVSAVSSFLFEHGANIIES     50

BSNT_02204___     51 NQYTTDPEGGRFFLRIEFDCAGIREKKASLQAAFASVAEKFDMTWSLTLA    100
                     :|||||.|.||||||||||...|......|:..|..:|..|.||||::.|
BPUM_1205___p     51 SQYTTDHESGRFFLRIEFDWKDISANMDQLKQQFEPIASSFQMTWSMSRA    100

BSNT_02204___    101 SELKRVAIFVSKELHCLHELIWEWQTGNLMAEIAVVISNHEEARELVERL    150
                     ||||::||||||||||||||:||||:|||||||||||||||.|::.||.|
BPUM_1205___p    101 SELKKLAIFVSKELHCLHELLWEWQSGNLMAEIAVVISNHETAKDTVEAL    150

BSNT_02204___    151 NIPFHYMKANKDIRAEVEKKQLELLEQYDVDVIVLARYMQILTPDFVSAH    200
                     .||||::|||||||.|.||:||.|||:||:|.||||||||||||.|:..|
BPUM_1205___p    151 GIPFHFVKANKDIRKEAEKEQLALLEEYDIDAIVLARYMQILTPGFIEQH    200

BSNT_02204___    201 PNRIINIHHSFLPAFIGANPYKRAYERGVKLIGATSHYVTNDLDEGPIIE    250
                     ||:|||||||||||||||||||||||||||||||||||||||||||||||
BPUM_1205___p    201 PNKIINIHHSFLPAFIGANPYKRAYERGVKLIGATSHYVTNDLDEGPIIE    250

BSNT_02204___    251 QDIERVDHRDNAEALKNIGRTIERSVLARAVKWHLEDRVIVHENKTIVFN    300
                     ||||||||||:|||||||||||||||||||||||||||:|||||||||||
BPUM_1205___p    251 QDIERVDHRDDAEALKNIGRTIERSVLARAVKWHLEDRIIVHENKTIVFN    300


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