Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02200 and BPUM_1199
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:40
# Commandline: needle
# -asequence pep-align/BSNT_02200___ykkB.1.24716.seq
# -bsequence pep-align/BPUM_1199.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02200___ykkB-BPUM_1199.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02200___ykkB-BPUM_1199.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02200___ykkB
# 2: BPUM_1199
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 181
# Identity: 87/181 (48.1%)
# Similarity: 114/181 (63.0%)
# Gaps: 9/181 ( 5.0%)
# Score: 454.5
#
#
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BSNT_02200___ 1 --MNAKTKLVTDRIRLRCMEDRDQATLFGLLFNDPDVMTYYSGLKDKRQT 48
...:|.|.|:|:|||.|.:.|...|:.:||.|.:||.||..|||::||
BPUM_1199 1 MQHQTRTVLKTERLRLRTMNEHDAPFLYHMLFQDEEVMKYYPSLKDEQQT 50
BSNT_02200___ 49 REWVNWNQRNEKGYGVSLWIAEDKRTGEFLGQCGTVPQQIENQTVMEIGY 98
:||:.|||:|::.|..||||.|||.|.|..||.|.|.|.||.||.:||||
BPUM_1199 51 KEWIAWNQKNDRVYHTSLWIIEDKETNEPFGQSGIVLQNIEGQTELEIGY 100
BSNT_02200___ 99 MFARRHWGNGYAQEAARACLDYGFNERQFGKMAALIDPGNKASIRVAEKI 148
|..:..||||||.|||:.||.|||.|.:..:|.:||.|.|:||::||.|:
BPUM_1199 101 MLKKAAWGNGYAAEAAKGCLTYGFEEMKVRRMVSLIRPDNEASVKVALKM 150
BSNT_02200___ 149 GMHHSETTRKWNKPIAVY--ERKSYN----- 172
||...:|..||::.|.|| .|...|
BPUM_1199 151 GMKKEKTISKWDQIIDVYSINRNEENGSLTK 181
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