Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02193 and BPUM_1193
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:39
# Commandline: needle
# -asequence pep-align/BSNT_02193.1.24716.seq
# -bsequence pep-align/BPUM_1193.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02193-BPUM_1193.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02193-BPUM_1193.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02193
# 2: BPUM_1193
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 293
# Identity: 82/293 (28.0%)
# Similarity: 112/293 (38.2%)
# Gaps: 136/293 (46.4%)
# Score: 428.0
#
#
#=======================================
BSNT_02193 0 -------------------------------------------------- 0
BPUM_1193 1 MDSIRAEQIHKMPQCMSEYDNLQEVLLCSPIYMEIKQIINETQKHFAREN 50
BSNT_02193 0 -------------------------------------------------- 0
BPUM_1193 51 ISQMKAIAQHKQLIQILKNHQVRPIMLPANDRYPEQVFTRDIGFTIGHTL 100
BSNT_02193 1 ------------------------------MLDTSIEGGDVIIDDDIVYV 20
:.:.:||||||::|...|:|
BPUM_1193 101 FVSSMAAPVRQGEEQLLKEWAQENGFKTVSLTNGTIEGGDVLVDQTRVFV 150
BSNT_02193 21 GISQRTVISAIGQLEEALPEYTIVPVKLHEKFLHLDCVFNIVSESEALIY 70
|:|:||..:||.:|::.||::.|:|:.|....||||||.||:|..|.|||
BPUM_1193 151 GMSKRTNPAAIHELKKELPDHDIIPIHLPPHILHLDCVMNILSHDEMLIY 200
BSNT_02193 71 PQAIEPDAADMLAKRYDLIEVPEDEQFTLGTNVLSIEKKTIISLPGNRHV 120
|:|.:.:...:|...|.|||:.|.||||||.|||||.:|.:||||.|:..
BPUM_1193 201 PEAFKKEDLHLLNMHYHLIEISEQEQFTLGPNVLSIGQKKVISLPINQET 250
BSNT_02193 121 NQQLSKRGYHIIEIDLSEIIKSGGSFRCCTMPLIRGE------ 157
|..|:..||.:||:|.||||||||||||||:|:.|..
BPUM_1193 251 NAALTAHGYTVIEVDFSEIIKSGGSFRCCTLPIRRSSTKKASV 293
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