Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02190 and BPUM_1192
See
DNA alignment /
Visit
BSNT_02190 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:39
# Commandline: needle
# -asequence pep-align/BSNT_02190___ykfD.1.24716.seq
# -bsequence pep-align/BPUM_1192.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02190___ykfD-BPUM_1192.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02190___ykfD-BPUM_1192.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02190___ykfD
# 2: BPUM_1192
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 329
# Identity: 234/329 (71.1%)
# Similarity: 277/329 (84.2%)
# Gaps: 7/329 ( 2.1%)
# Score: 1256.0
#
#
#=======================================
BSNT_02190___ 1 MTPLPLLEVSQLKMHFDAGKKRTVKAVDGVTFQIREGETFGLVGESGCGK 50
|...|||:|:.||.||...|.||:||:|||:||:::||||||||||||||
BPUM_1192 1 MAVEPLLQVNNLKKHFHLSKGRTLKALDGVSFQLKQGETFGLVGESGCGK 50
BSNT_02190___ 51 STLGRVLMRLYQPTEGSVTYRGTNLHALSEKEQFAFNRKLQMIFQDPYAS 100
||||:||||||:||:|...|.|.:||.||:||.|.|||::||:|||||:|
BPUM_1192 51 STLGKVLMRLYEPTDGEALYEGKSLHHLSQKESFDFNRQIQMVFQDPYSS 100
BSNT_02190___ 101 LNPRMTVREIILEPMEIHNLYNTHKARLLVVDELLEAVGLHPDFGSRYPH 150
||||::|::|:||||||||||.:.|.|:..|.||||||||..||.:||||
BPUM_1192 101 LNPRLSVKDIMLEPMEIHNLYRSQKKRVARVKELLEAVGLSYDFATRYPH 150
BSNT_02190___ 151 EFSGGQRQRIGIARALSLNPEFIVADEPISALDVSVQAQVVNLLKRLQKE 200
||||||||||||||||:|.|:||||||||||||||||||||||||:||||
BPUM_1192 151 EFSGGQRQRIGIARALALAPKFIVADEPISALDVSVQAQVVNLLKKLQKE 200
BSNT_02190___ 201 KGLTFLFIAHDLSMVKHISDRIGVMYLGHMMEITESGTLYREPLHPYTKA 250
:|||||||||||||||:||||||||||||::|:|.|..||:.||||||:|
BPUM_1192 201 EGLTFLFIAHDLSMVKYISDRIGVMYLGHLVELTSSDALYQTPLHPYTQA 250
BSNT_02190___ 251 LLSSIPIPDPELEDKRERILLKGELPSPVNPPSGCVFRTRCPEAMPECGE 300
|||:||||||::||||:|.:||||:|||||||||||||||||.||..|.|
BPUM_1192 251 LLSAIPIPDPDVEDKRKRFILKGEIPSPVNPPSGCVFRTRCPAAMDVCAE 300
BSNT_02190___ 301 SRPQLQEIEPGRFVACHLYRNAETKEKVR 329
.:|.||.:|.|..||||||...
BPUM_1192 301 KKPTLQAVEEGHDVACHLYDRT------- 322
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.