Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02189 and BPUM_1191

See DNA alignment / Visit BSNT_02189 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:39
# Commandline: needle
#    -asequence pep-align/BSNT_02189___ykfC.1.24716.seq
#    -bsequence pep-align/BPUM_1191___ykfC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02189___ykfC-BPUM_1191___ykfC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02189___ykfC-BPUM_1191___ykfC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02189___ykfC
# 2: BPUM_1191___ykfC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 309
# Identity:     139/309 (45.0%)
# Similarity:   195/309 (63.1%)
# Gaps:          17/309 ( 5.5%)
# Score: 710.5
# 
#
#=======================================

BSNT_02189___      1 MMHTVISAVANIWTAPDSPRPSDQFMLQPTVMIRDWLERMTYDERLGLCT     50
                     |:.....||||:||.|.|||..||.:||.:..:::|:::.||:|:|.||.
BPUM_1191___y      1 MIFESKVAVANVWTTPQSPREMDQKVLQSSFKMKEWIDKQTYEEKLALCE     50

BSNT_02189___     51 DNVIQTQVLFGEKVLVTAEQEEWVSVIVPSQPSRKDPRGYPGWMKKNQLA    100
                     :|::|:|||.||:|:...|.:.|:.|::|.|.:||.|:||||::..|||.
BPUM_1191___y     51 ENLLQSQVLLGERVIGLEETDGWMKVVIPQQATRKHPQGYPGYIPANQLK    100

BSNT_02189___    101 K----SMPIHSQHDVMISKPAAFLYKSNEEKEIELSFLTVLPLIAEENGY    146
                     :    |.|..|.   ::.:..|.||: |.:.::|:||||.|..:.|.:..
BPUM_1191___y    101 QVTEGSAPAISH---IVCQKRAMLYR-NGQADMEISFLTELAAVEETSDR    146

BSNT_02189___    147 FKVSTVLGDRFVKQSDAVPVSKQKG-TAEDIIQTGAFFLGLPYLWGGISG    195
                     |:|.|..|.|.:.::|..|||.... |.:|:::.|..|:.|.|||||:|.
BPUM_1191___y    147 FRVVTPAGTREINKTDVQPVSSTSDMTGKDVVEKGKQFIDLSYLWGGMSS    196

BSNT_02189___    196 FGFDCSGFMYSIFKANGYSIPRDAGDQAKAGKGVPLDDMKAGDLLFFAYE    245
                     ||:|||||.||::||.||.:||||.|||..|..|....:|.|||||||.:
BPUM_1191___y    197 FGYDCSGFAYSMYKACGYLLPRDASDQAVQGTPVASSHLKQGDLLFFAND    246

BSNT_02189___    246 EGKGAIHHVGLYVGGGKMLHSPKTGKSIEILTLKDIIYEKELCAVRRCF-    294
                     .||||:.|||:|.|.|.|||||||||.||:|......||||....||.. 
BPUM_1191___y    247 NGKGAVRHVGIYAGDGMMLHSPKTGKEIELLFFSGTSYEKEWAGARRYLP    296

BSNT_02189___    295 SE-------    296
                     ||       
BPUM_1191___y    297 SEGSKGHGS    305


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