Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02188 and BPUM_1190

See DNA alignment / Visit BSNT_02188 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:39
# Commandline: needle
#    -asequence pep-align/BSNT_02188___ykfB.1.24716.seq
#    -bsequence pep-align/BPUM_1190___ykfB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02188___ykfB-BPUM_1190___ykfB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02188___ykfB-BPUM_1190___ykfB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02188___ykfB
# 2: BPUM_1190___ykfB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 361
# Identity:     232/361 (64.3%)
# Similarity:   279/361 (77.3%)
# Gaps:           4/361 ( 1.1%)
# Score: 1141.5
# 
#
#=======================================

BSNT_02188___      1 MKIIRIETSRIAIPLTKPFKTALRTVYTAESVIVRITYDSGAVGWGEAPP     50
                     |||:.:.|.|:::||.|||||||||||.|.|:||.:|||.|.|.:|||.|
BPUM_1190___y      1 MKIVDVRTCRMSVPLKKPFKTALRTVYDAASLIVIVTYDQGDVSYGEAVP     50

BSNT_02188___     51 TLVITGDSMDSIESAIHNVLKPALLGKSLAGYEAILHDIQHLLTGNMSAK    100
                     |.||||::::||:.||..|::|.|||.||:.||.|...:..:|..|.|||
BPUM_1190___y     51 TAVITGETLESIDYAICEVIRPILLGASLSEYEQIFSRMNRVLACNTSAK    100

BSNT_02188___    101 AAVEMALYDGWAQMCGLPLYQMLGGYRDTLETDYTVSVNSPEEMAADAEN    150
                     |||:||:|||.|:..||||||.|||||..||||||||||.|.|||.||:.
BPUM_1190___y    101 AAVDMAIYDGLAKQAGLPLYQYLGGYRSQLETDYTVSVNRPLEMAEDAKQ    150

BSNT_02188___    151 YLKQGFQTLKIKVGKDDIATDIARIQEIRKRVGSAVKLRLDANQGWRPKE    200
                     |..:||||||||||||||.|||.||:.||::||..:::||||||||..||
BPUM_1190___y    151 YAAEGFQTLKIKVGKDDIDTDIQRIKRIREKVGPDIQIRLDANQGWTWKE    200

BSNT_02188___    201 AVTAIRKMEDAGLGIELVEQPVHKDDLAGLKKVTDATDTPIMADESVFTP    250
                     ||.||||||  .|.||||||||.|:|:.||::||:||||.||||||:|:.
BPUM_1190___y    201 AVVAIRKME--SLNIELVEQPVPKEDIEGLRRVTEATDTLIMADESIFSF    248

BSNT_02188___    251 RQAFEVLQTRSADLINIKLMKAGGISGAEKINAMAEACGVECMVGSMIET    300
                     ..|.:||:|||.||||:||||:|||..|.||||:|||.||:||||||||:
BPUM_1190___y    249 HDAIKVLETRSCDLINLKLMKSGGIKEALKINALAEAYGVKCMVGSMIES    298

BSNT_02188___    301 KLGITAAAHFAASKRNITRFDFDAPLMLKTDVFKGGITYSGSTISMPGKP    350
                     |||||||||.|||:.||||:|||||||||.|:..|||.|.|..|..|.:.
BPUM_1190___y    299 KLGITAAAHLAASQPNITRYDFDAPLMLKEDMVDGGILYKGKDIFFPPQH    348

BSNT_02188___    351 GLGITGTAL--    359
                     ||||.|...  
BPUM_1190___y    349 GLGIRGVKGVS    359


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