Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02187 and BPUM_1189

See DNA alignment / Visit BSNT_02187 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:39
# Commandline: needle
#    -asequence pep-align/BSNT_02187.1.24716.seq
#    -bsequence pep-align/BPUM_1189___ykfA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02187-BPUM_1189___ykfA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02187-BPUM_1189___ykfA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02187
# 2: BPUM_1189___ykfA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 313
# Identity:     194/313 (62.0%)
# Similarity:   240/313 (76.7%)
# Gaps:           0/313 ( 0.0%)
# Score: 1031.0
# 
#
#=======================================

BSNT_02187         1 MNYKPKALKKGDTVGVIAPASPPDQKKLDTALLFLEELGLQVKLGKALKN     50
                     |:..|.||:.||||||||||||||:.||...:.|||.|||:||.||.|..
BPUM_1189___y      1 MSQLPVALQTGDTVGVIAPASPPDELKLAKGIAFLESLGLKVKKGKYLDR     50

BSNT_02187        51 QHGYLAGQDDERLADLHEMFRDEEVKAVLCACGGFGTGRIAAGIDFSLIR    100
                     ::|||||.|.||:.|||.||:|.|||||:|||||:||||:|..|::.|||
BPUM_1189___y     51 RYGYLAGHDHERVEDLHCMFQDPEVKAVICACGGYGTGRLAEAINYDLIR    100

BSNT_02187       101 KHPKIFWGYSDITFLHTAIHQNTGLVTFHGPMLSSDIGLDDVHPLTKASY    150
                     ::|||||||||||||||||.|.||||||||||||||:||::|||.||.::
BPUM_1189___y    101 RNPKIFWGYSDITFLHTAIQQQTGLVTFHGPMLSSDVGLEEVHPYTKDTF    150

BSNT_02187       151 KQLFQETEFTYTEELSPLTALVPGKAEGELVGGNLSLLTSTLGTPFEIDT    200
                     .|||....|||...||||....||.|.||:|||||:|:.:||||||||||
BPUM_1189___y    151 LQLFAPKTFTYAHHLSPLHTFYPGTASGEIVGGNLALIVTTLGTPFEIDT    200

BSNT_02187       201 RGKLLFIEDIDEEPYQIDRMLNQLKMAGKLTDAAGILVCDFHNCVPVKRE    250
                     :||||||||||||||:||||:..|..||||.||||.::.|||.|.|.|::
BPUM_1189___y    201 KGKLLFIEDIDEEPYKIDRMMQHLTSAGKLDDAAGFIIGDFHQCEPKKKD    250

BSNT_02187       251 KSLSLEQVLEDYIISAGRPALRGFKIGHCSPSIAVPIGAKAAMNTAEKTV    300
                     :||:|.||.:.||:...:|||.||:|||.||:.|:|:|.:||::...|.:
BPUM_1189___y    251 QSLTLNQVWDTYIVPQKKPALGGFRIGHSSPNFAIPMGTQAALDATGKKL    300

BSNT_02187       301 VIEAGVSEGALKT    313
                     .|..||:.....|
BPUM_1189___y    301 HISPGVAAKEAIT    313


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