Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02184 and BPUM_1187
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:38
# Commandline: needle
# -asequence pep-align/BSNT_02184___dppD.1.24716.seq
# -bsequence pep-align/BPUM_1187___dppD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02184___dppD-BPUM_1187___dppD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02184___dppD-BPUM_1187___dppD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02184___dppD
# 2: BPUM_1187___dppD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 337
# Identity: 240/337 (71.2%)
# Similarity: 279/337 (82.8%)
# Gaps: 4/337 ( 1.2%)
# Score: 1243.0
#
#
#=======================================
BSNT_02184___ 1 MEKVLSVQNLHVSFTTYGGTVQAVRGVSFDLYQGETFAIVGESGCGKSVT 50
|:|||.:.:|||||.||||:|:|||||:.|:|:.||.|||||||||||||
BPUM_1187___d 1 MKKVLQIIDLHVSFRTYGGSVRAVRGVNVDVYEKETLAIVGESGCGKSVT 50
BSNT_02184___ 51 SQSIMGLLPPYSAKVTDGSILFKNIDLCRLSDKEMRGIRGADISMIFQDP 100
|||||.|||.|||.|..|.|.|::.:|..||:||||.|||.|||||||||
BPUM_1187___d 51 SQSIMRLLPAYSAHVDQGEIWFEDRNLLSLSEKEMRAIRGVDISMIFQDP 100
BSNT_02184___ 101 MTALNPTLTVGDQLGEALLRHKKMSKKAARKEVLSMLSLVGIPDPEERLK 150
|||||||||:||||.||...|:|::||..::..:.||.|||||.|:||||
BPUM_1187___d 101 MTALNPTLTIGDQLMEAAKEHQKLTKKEVKEAAIRMLDLVGIPQPKERLK 150
BSNT_02184___ 151 QYPHQFSGGMRQRIVIAMALICEPDILIADEPTTALDVTIQAQILELFKE 200
|||||||||||||::|||||||||.:||||||||||||||||||||||||
BPUM_1187___d 151 QYPHQFSGGMRQRLMIAMALICEPKVLIADEPTTALDVTIQAQILELFKE 200
BSNT_02184___ 201 IQRKTNVSVILITHDLGVVAQVADRVAVMYTGKMAEIGTRKDIFYQPQHP 250
|||||.|::|||||||||||||||||||||.|||.|:|||:||||.||||
BPUM_1187___d 201 IQRKTGVTIILITHDLGVVAQVADRVAVMYGGKMVEVGTRRDIFYSPQHP 250
BSNT_02184___ 251 YTKGLLGSVPRLDLDGAELTPIDGTPPDLFSPPPGCPFAARCPNRMVVCD 300
||||||.||||||:.. ||.||:|:|||||:||.|||:..|||..|.|||
BPUM_1187___d 251 YTKGLLQSVPRLDMKD-ELVPIEGSPPDLFAPPKGCPYTDRCPAAMKVCD 299
BSNT_02184___ 301 RVYPGQTIRSDSHTVNCWLQDQRAEHAVLSGDAKD-- 335
.:.|.:|.||.:|||:|||||:||: .|||...:.
BPUM_1187___d 300 HIMPHETQRSPTHTVHCWLQDERAQ-TVLSSTQRGSF 335
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