Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02182 and BPUM_1185

See DNA alignment / Visit BSNT_02182 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:38
# Commandline: needle
#    -asequence pep-align/BSNT_02182___dppB.1.24716.seq
#    -bsequence pep-align/BPUM_1185___dppB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02182___dppB-BPUM_1185___dppB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02182___dppB-BPUM_1185___dppB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02182___dppB
# 2: BPUM_1185___dppB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 311
# Identity:     248/311 (79.7%)
# Similarity:   281/311 (90.4%)
# Gaps:           3/311 ( 1.0%)
# Score: 1294.0
# 
#
#=======================================

BSNT_02182___      1 MARYMIKRFWAMAATILVITTLTFVLMKVIPGSPFNEERGTNEAVQKNLE     50
                     |..:::|||.||.||||.||||||:||||||||||||||.|||.||:|||
BPUM_1185___d      1 MTSFLLKRFIAMIATILTITTLTFILMKVIPGSPFNEERNTNETVQRNLE     50

BSNT_02182___     51 AYYHLDDPLIFQYIFYLKSIITFDFGPSIKKPSDSVNDMLERGFPVSFEL    100
                     :|||||:||..||:.|||||:||||||||||||:||||:|.||||||.||
BPUM_1185___d     51 SYYHLDEPLYVQYVIYLKSIVTFDFGPSIKKPSESVNDLLARGFPVSLEL    100

BSNT_02182___    101 GMTAIVIAVISGLVLGVIAALRRNGFLDYAAMSLAVLGISIPNFILATLL    150
                     |:.:|:||||||::|||:||||.||.:||.||::||.||||||||.||||
BPUM_1185___d    101 GLISILIAVISGILLGVMAALRHNGLIDYIAMTIAVFGISIPNFIFATLL    150

BSNT_02182___    151 IQQFAVNLKLFPAATWTSPIHMVLPTAALAVGPMAIIARLTRSSMVEVLT    200
                     |||.||||||||.|.||||:||||||.||||.|||||||||||||:|||:
BPUM_1185___d    151 IQQLAVNLKLFPTAMWTSPMHMVLPTIALAVSPMAIIARLTRSSMIEVLS    200

BSNT_02182___    201 QDYIRTAKAKGLSPFKIIVKHALRNALMPVITVLGTLVASILTGSFVIEK    250
                     |||||||||||||||||:.||||||||:||:|:|||||||||||||||||
BPUM_1185___d    201 QDYIRTAKAKGLSPFKIVFKHALRNALLPVVTILGTLVASILTGSFVIEK    250

BSNT_02182___    251 IFAIPGMGKYFVESINQRDYPVIMGTTVFYSVILIIMLFLVDLAYGLLDP    300
                     ||||||||||||||||.||||||||||||||:|||.:||:||:||.||||
BPUM_1185___d    251 IFAIPGMGKYFVESINNRDYPVIMGTTVFYSIILITLLFIVDVAYRLLDP    300

BSNT_02182___    301 RIKLHKKG---    308
                     ||:||:||   
BPUM_1185___d    301 RIQLHQKGGKA    311


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