Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02182 and BPUM_1185
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:38
# Commandline: needle
# -asequence dna-align/BSNT_02182___dppB.1.24716.seq
# -bsequence dna-align/BPUM_1185___dppB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02182___dppB-BPUM_1185___dppB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02182___dppB-BPUM_1185___dppB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02182___dppB
# 2: BPUM_1185___dppB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 951
# Identity: 674/951 (70.9%)
# Similarity: 674/951 (70.9%)
# Gaps: 39/951 ( 4.1%)
# Score: 2342.5
#
#
#=======================================
BSNT_02182___ 1 TTGGCGCGATACATGA------------TAAAGCGTTTTTGGGCAATGGC 38
|||| |.||.||||||...||.|||..
BPUM_1185___d 1 ------------ATGACCAGCTTTTTGCTCAAACGTTTTATTGCGATGAT 38
BSNT_02182___ 39 AGCTACGATTTTGGTGATTACCACCCTGACTTTTGTTCTCATGAAGGTCA 88
.||.||||||||...||||||.||..|.||.|||.||.|.||||||||||
BPUM_1185___d 39 TGCCACGATTTTAACGATTACGACGTTAACGTTTATTTTAATGAAGGTCA 88
BSNT_02182___ 89 TTCCCGGATCTCCTTTTAACGAGGAGAGAGGCACAAATGAAGCCGTTCAA 138
|.||.|||||.||.||.||.||.||..||...|||||.|||.|||||||.
BPUM_1185___d 89 TCCCAGGATCGCCCTTCAATGAAGAACGAAATACAAACGAAACCGTTCAG 138
BSNT_02182___ 139 AAAAATCTCGAAGCCTACTATCACTTAGACGATCCTCT-CATTTTCCAAT 187
..|||.||||||..||||||||||||||||||.||.|| .||.|| ||||
BPUM_1185___d 139 CGAAACCTCGAAAGCTACTATCACTTAGACGAACCACTGTATGTT-CAAT 187
BSNT_02182___ 188 ACATTTTCTACTTAAAATCCATCATTACATTCGATTTCGGACCTTCAATT 237
|..|..||||.||||||||||||.||||.||.|||||.||.|||||.|||
BPUM_1185___d 188 ATGTCATCTATTTAAAATCCATCGTTACCTTTGATTTTGGTCCTTCCATT 237
BSNT_02182___ 238 AAAAAACCGTCGGACAGCGTAAATGATATGCTGGAACGCGGATTTCCCGT 287
|||||.||.||.||.||.||.||||||.|..|||...|.||.||.||.||
BPUM_1185___d 238 AAAAAGCCTTCTGAAAGTGTCAATGATCTATTGGCGAGAGGCTTCCCAGT 287
BSNT_02182___ 288 TTCCTTTGAGCTTGGGATGACAGCGATTGTCATTGCTGTGATTTCTGGGC 337
.||.||.||.|||||..|.|...|.||..|.||||||||.||.||.||..
BPUM_1185___d 288 CTCATTAGAACTTGGTCTTATCTCAATATTGATTGCTGTCATCTCCGGCA 337
BSNT_02182___ 338 TGGTGCTGGGCGTAATCGCTGCACTCCGCCGCAATGGGTTTTTGGACTAC 387
|..||||.||.||.||.|||||.|||||.|.||||||.||..|.||.||.
BPUM_1185___d 338 TTCTGCTAGGGGTCATGGCTGCCCTCCGGCACAATGGCTTGATTGATTAT 387
BSNT_02182___ 388 GCCGCGATGAGTCTTGCAGTACTCGGCATCTCCATCCCGAATTTTATTCT 437
..|||.||||...||||.||..||||.||.|||||.||.||.|||||..|
BPUM_1185___d 388 ATCGCCATGACCATTGCTGTTTTCGGTATATCCATTCCAAACTTTATCTT 437
BSNT_02182___ 438 GGCAACATTGCTCATTCAGCAATTTGCTGTCAATCTCAAACTATTTCCCG 487
.||.||.||..|.||||||||..|||||||.|||.|.||.||.|||||..
BPUM_1185___d 438 TGCTACCTTATTAATTCAGCAGCTTGCTGTGAATTTGAAGCTCTTTCCTA 487
BSNT_02182___ 488 CTGCCACATGGACGAGCCCGATTCATATGGTGCTTCCGACCGCAGCGCTT 537
|.||.|..|||||.||.|||||.|||||||||||.||.|||...||.|||
BPUM_1185___d 488 CAGCGATGTGGACAAGTCCGATGCATATGGTGCTACCAACCATTGCTCTT 537
BSNT_02182___ 538 GCTGTAGGGCCAATGGCGATCATTGCCAGGCTGACACGGTCGAGCATGGT 587
||.||..|.||.|||||.||.|||||..||.|.|||.|.|||||||||.|
BPUM_1185___d 538 GCCGTTAGTCCGATGGCCATAATTGCTCGGTTAACAAGATCGAGCATGAT 587
BSNT_02182___ 588 CGAAGTTCTGACACAGGATTATATCCGCACAGCAAAAGCAAAAGGGCTTT 637
.|||||.|||.|.|||||.|||||.|||||.||.|||||||||||.||||
BPUM_1185___d 588 TGAAGTGCTGTCTCAGGACTATATTCGCACTGCTAAAGCAAAAGGACTTT 637
BSNT_02182___ 638 CTCCGTTCAAAATTATCGTAAAACACGCACTCAGAAATGCACTCATGCCC 687
||||.||.||||||.|..|.|||||.||.||..|||||||.||..||||.
BPUM_1185___d 638 CTCCCTTTAAAATTGTGTTCAAACATGCGCTTCGAAATGCGCTTTTGCCT 687
BSNT_02182___ 688 GTCATTACCGTCCTGGGCACACTCGTCGCCAGCATCTTAACAGGAAGCTT 737
||..|.|||.|.||.||||||||.|||||.|||||.|||||||||||.||
BPUM_1185___d 688 GTTGTGACCATTCTTGGCACACTTGTCGCAAGCATTTTAACAGGAAGTTT 737
BSNT_02182___ 738 TGTCATTGAAAAAATCTTTGCCATTCCGGGAATGGGAAAATATTTTGTTG 787
|||||||||||||||||||||.|||||.||.|||||||||||.|||||.|
BPUM_1185___d 738 TGTCATTGAAAAAATCTTTGCGATTCCTGGCATGGGAAAATACTTTGTCG 787
BSNT_02182___ 788 AAAGCATTAATCAGCGGGACTACCCCGTGATTATGGGAACGACCGTTTTT 837
|.||.|||||..|.||.||.||.||.||.|||||||||||.||.||||||
BPUM_1185___d 788 AGAGTATTAACAACCGTGATTATCCTGTCATTATGGGAACCACTGTTTTT 837
BSNT_02182___ 838 TACAGCGTCATTCTGATTATCA-TGCTGTTTTTGGTCGATTTGGCCTACG 886
||||||.|||||.|.||.| || |.||.||..|.||.|||.||||.||..
BPUM_1185___d 838 TACAGCATCATTTTAATCA-CACTTCTTTTCATTGTTGATGTGGCGTATC 886
BSNT_02182___ 887 GTCT-CTTAGACCCGCGCATTAAACTGCATAAGAAAGGGTGA-------- 927
|.|| ||| ||.|||.|.|||.|.||.|||.|||||||..||
BPUM_1185___d 887 GCCTGCTT-GATCCGAGAATTCAGCTACATCAGAAAGGAGGAAAGGCATG 935
BSNT_02182___ 927 - 927
BPUM_1185___d 936 A 936
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