Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02181 and BPUM_1184

See DNA alignment / Visit BSNT_02181 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:38
# Commandline: needle
#    -asequence pep-align/BSNT_02181___dppA.1.24716.seq
#    -bsequence pep-align/BPUM_1184___dppA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02181___dppA-BPUM_1184___dppA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02181___dppA-BPUM_1184___dppA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02181___dppA
# 2: BPUM_1184___dppA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 276
# Identity:     190/276 (68.8%)
# Similarity:   228/276 (82.6%)
# Gaps:           2/276 ( 0.7%)
# Score: 1017.0
# 
#
#=======================================

BSNT_02181___      1 --MKLYMSVDMEGISGLPDDTFVDSGKRNYERGRLIMTEEANYCIAEAFN     48
                       ||||:|||||||:||.|.||||:.:.||||||.|||.|.|.|:.....
BPUM_1184___d      1 MGMKLYVSVDMEGITGLADHTFVDARQHNYERGRKIMTGEVNACVEVLLQ     50

BSNT_02181___     49 SGCTEVLVNDSHSKMNNLMVEKLHPEADLISGDVKPFSMVEGLDDTFTGA     98
                     .|.|::||||||||||||::|:||.||.||||||||:|||:|||.|:..|
BPUM_1184___d     51 HGATDILVNDSHSKMNNLLIEELHEEASLISGDVKPYSMVQGLDQTYAAA    100

BSNT_02181___     99 LFLGYHARASTPGVMSHSMIFGVRHFYINDRPVGELGLNAYVAGYYDVPV    148
                     :|||||||||..||||||||||||||||||.|:||:|.||||||||.|||
BPUM_1184___d    101 VFLGYHARASMKGVMSHSMIFGVRHFYINDHPIGEMGFNAYVAGYYGVPV    150

BSNT_02181___    149 LMVAGDDRAAKEAEELIPNVTTAAVKQTISRSAVKCLSPAKAGRLLTEKT    198
                     ::|.|||:||.|||:|||.|.|.|||:||||||||||:|||..:.::::.
BPUM_1184___d    151 ILVCGDDQAALEAEKLIPGVKTVAVKETISRSAVKCLTPAKVNQQISQQV    200

BSNT_02181___    199 AFALQNKDKVKPLTPPDRPVLSIEFANYGQAEWANLMPGTEIKTGTTTVQ    248
                     ..|::....:|||||||:|:|.||||||||||||||||||.:..|||||.
BPUM_1184___d    201 EAAMKQIHHIKPLTPPDQPLLKIEFANYGQAEWANLMPGTAMIEGTTTVT    250

BSNT_02181___    249 FQAKDMLEAYQAMLVMTELAMRTSFC    274
                     :||:::||||||||||||||.||:||
BPUM_1184___d    251 YQAENILEAYQAMLVMTELAARTTFC    276


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